Detailed information of ENSOFVP00000024187.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020614071.1, probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X2 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q922K728S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nop2 PE=1 SV=1
P4608728S rRNA (cytosine(4447)-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=NOP2 PE=1 SV=2
O9426825S rRNA (cytosine-C(5))-methyltransferase nop2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nop2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003940 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01189
all species →		Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR018314
all species →		Conserved_siteBacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved siteInterproscan
IPR023267
all species →		FamilyRNA (C5-cytosine) methyltransferaseInterproscan
IPR049560
all species →		DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan
IPR001678
all species →		DomainSAM-dependent methyltransferase RsmB-F/NOP2-type domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22807
all species →		NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0008168
all species →		Molecular Functionmethyltransferase activityInterproscan
GO:0000470
all species →		Biological Processmaturation of LSU-rRNAInterproscan
GO:0001510
all species →		Biological ProcessRNA methylationInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0008173
all species →		Molecular FunctionRNA methyltransferase activityInterproscan
GO:0009383
all species →		Molecular FunctionrRNA (cytosine-C5-)-methyltransferase activityInterproscan
GO:0070475
all species →		Biological ProcessrRNA base methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000024187.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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