Gene detail

Detailed information of ENSOFVP00000024573.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_027056304.1, uncharacterized protein LOC113683279 isoform X1 [Pocillopora damicornis]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000026609

GTGCAACCATGCTGCACAGATGCAAAGCTTTACTACAGCAAAGAGTCAGCTTTTGTAGGGCTCTGAGTAATTCTACCAAGGGGAGAACTAAGGACACACAAAGCGTGAATTCTATCAAGGCTCTGGTGTCTGGAAATGCTATTGAAATAGAATGGAAAGATGGCCACACATCCAAaTTCCATAATAGTTGGTTACGGTTTTGTTGCCAGTGTGAACAATGTCGGCAAGCACACAGTGGCCAGAAGACCTTTGATGTGTTGTCCATTCCAGACCCATTAGAACTTTCAGATTTCTCAGTTTCGAAAAATCATGAGAATCTTCAGCTGACCTTTGAAAATGAAGGTGATCATCAGGGAGTGATCAGCTTACAATGGCTGAGAGAGAATTGCTATTCTGATGCAGCCAGAAGAATTGATAGCCAAAAGAGAATCACACAGCCTCATTTAGGAGAGCACAGCCTGCCAGAGGTTAACTACAGTGACATTACGGAGTCAAAGGAAGGTCTATGGAAAATGCTGTCCCAATTAAGTGACCATGGTGTATCATTAGTCAAGGATGTCCCCACAGATGAGGATCATTGTGCAAAGGTTGCGAGGCTATTTGGACCTCTACAGGAAACGATTTATGGCAGTTCTTTTGAAGTCAAGAGTGTACCTAACCCTATAAATATTGCGTACTCTAATGTGGCTCTTGGCCTTCACATGGATCTTATGTACTACGAGTCTCCCCCCGGGCTGCAGCTACTTCACTGCTTAAGGTTCGATCCTGAGGTTGAAGGAGGAGAAAGCTTGTTTTTGGATTCTTTCCATGTTGCTGAGGAATTCAGAAAGCAGTTTCCTGATCAGTTTGAAAATCTTGTGCGAATACCAGGAACATTTCAAAAAATACACTTTGACAGGGATTATCCAGTCAAACTAGTGTACAAGAGGCCACACATCGTTCTTAACCCTGACAAAGAGATTGTGGCTGTTAATTGGTCGCCTGCTTTTGAAGGGACCCTTTCAGTACCAGAGGAAGATGTTGAGCCGTACTATGAAGCATACAGGACATTTACAAAGCTCCTTGATGAATCGCCAATACAGaaGTCTGTAAAAATGCAGCCTGGAGACCTAGTATGCTTCAATAATCGACGAGTGCTTCATGGAAGGAAAGCATTTACTTTAAGTGGAGGAATCAGGTTTTTTatgGGTACCTATGTGAATATCGACGAATTCAGGAATACATTTCAAGTGACGTCAGAGCTTGTTGGATCGGGAGAGCCTTGCAAGCGGATTGGGAATCAGTGCTTTCTATAGAATCTGCTAAACCTCCGTTTGCGACCACCTTTCTTCAGCCACCAGTTTTCCAAattaccaaaagtttccaagtcaaattactatatttgaaacctcttataagcgaccactttcagaactaaaaagttgaaaatttcGTTTGGTTTTGCCTCCCgaaagcgaccacttgacagataatggagcgaaaaatggataattagTTGTTGTAATATTATCGTATTCCTGggtagtacaagaaacggacaTCTCTCAACCggaagaacaggatttttctctcgaaattgacttttacacgAATGAAATATTGCATCAGCATTTGCCgtattctaatgaggaaaaaaaTTGACCCATTATGATCTATGCTCTCGTGAGCGACCATCTAAgtttgacattttgggtggtcgcttacggaaggttcgactgtatctcCAATACTTATATGCGAGCAGCTTCCTTTTTGTAGTACTTTTAAAGGAAAAGGGAAAGGCCTCTTGACAGTAAAGCTTCCTCGCTGACGTACATACAATTCAAGAGTTTCCATTGGCTTAGCCATTGGCTATTATCATCTCATACGCGCACTCgtgaaataattgttaaatatattttatttttattttgtggtTTGTCTAGGCCTGCTTTGTGTAATAAGCATGGTAATGATTATGTACTCAGTTACTTACGCCCTTACCTTGTTTTTTCCTTATTTACTGTACGGGTTCTTTTGAAGCCATCGCCTTGTAATTTCAGAGTATTAAACTTCGACAACAACTTACAGCAACAATCTAGAGCGATTTTTTAACTGAGTGTGGAAAGTAATCAGACAGTTGCTTTGGTTTTGtcttactacggtttgagatagGCTGAGTAGTATAATTGATATAAAGtacttggttttggttttacgacactcaattgaaaaccgctctaaaggaTTTTAAAATAGTACTTAAAGGATTATAGCACTATTATAGCATATTCAGGAGAGAAGGCAGATATTGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q924Y0	Gamma-butyrobetaine dioxygenase OS=Mus musculus OX=10090 GN=Bbox1 PE=1 SV=1
A0A384XR80	Dioxygenase str8 OS=Strobilurus tenacellus OX=41251 GN=str8 PE=1 SV=1
A5DCB6	Trimethyllysine dioxygenase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=PGUG_00921 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005841 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02668 all species →	TauD	Taurine catabolism dioxygenase TauD, TfdA family	Domain	Interproscan
PF06155 all species →	GBBH-like_N	Gamma-butyrobetaine hydroxylase-like, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042098 all species →	Homologous_superfamily	Taurine dioxygenase TauD-like superfamily	Interproscan
IPR038492 all species →	Homologous_superfamily	GBBH-like, N-terminal domain superfamily	Interproscan
IPR050411 all species →	Family	Alpha-ketoglutarate-dependent hydroxylases	Interproscan
IPR003819 all species →	Domain	TauD/TfdA-like domain	Interproscan
IPR010376 all species →	Domain	Gamma-butyrobetaine hydroxylase-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10696 all species →	GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0045329 all species →	Biological Process	carnitine biosynthetic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000024573.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.