Detailed information of ENSOFVP00000024575.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: PFX28049.1, Small subunit processome component 20-like [Stylophora pistillata]
Species Cyphastrea salae · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O75691Small subunit processome component 20 homolog OS=Homo sapiens OX=9606 GN=UTP20 PE=1 SV=3
Q5XG71Small subunit processome component 20 homolog OS=Mus musculus OX=10090 GN=Utp20 PE=1 SV=2
O60055U3 small nucleolar RNA-associated protein 20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp20 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002640 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02373
all species →
JmjCJmjC domain, hydroxylaseDomainInterproscan
PF20416
all species →
UTP20_CU3 small nucleolar RNA-associated protein 20, C-terminalDomainInterproscan
PF07539
all species →
UTP20_NU3 small nucleolar RNA-associated protein 20, N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003347
all species →
DomainJmjC domainInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR046523
all species →
DomainU3 small nucleolar RNA-associated protein 20, C-terminalInterproscan
IPR011430
all species →
DomainU3 small nucleolar RNA-associated protein 20, N-terminalInterproscan
IPR052575
all species →
FamilySmall subunit processome component 20Interproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17695
all species →
UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005730
all species →
Cellular ComponentnucleolusInterproscan
GO:0030686
all species →
Cellular Component90S preribosomeInterproscan
GO:0032040
all species →
Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06640ATR; serine/threonine-protein kinase ATREC:2.7.11.1
DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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