Genomic Location: not available for this species
NR annotation: PFX28049.1, Small subunit processome component 20-like [Stylophora pistillata]
Species Cyphastrea salae · all data for this species · gene families
| CDS |
| ENSOFVT00000026611 |
| Transcript |
| ENSOFVT00000026611 |
| Protein |
| ENSOFVP00000024575.1 |
| UniProt accession | Description |
|---|---|
| O75691 | Small subunit processome component 20 homolog OS=Homo sapiens OX=9606 GN=UTP20 PE=1 SV=3 |
| Q5XG71 | Small subunit processome component 20 homolog OS=Mus musculus OX=10090 GN=Utp20 PE=1 SV=2 |
| O60055 | U3 small nucleolar RNA-associated protein 20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp20 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002640 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02373 all species → | JmjC | JmjC domain, hydroxylase | Domain | Interproscan |
| PF20416 all species → | UTP20_C | U3 small nucleolar RNA-associated protein 20, C-terminal | Domain | Interproscan |
| PF07539 all species → | UTP20_N | U3 small nucleolar RNA-associated protein 20, N-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003347 all species → | Domain | JmjC domain | Interproscan |
| IPR016024 all species → | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR046523 all species → | Domain | U3 small nucleolar RNA-associated protein 20, C-terminal | Interproscan |
| IPR011430 all species → | Domain | U3 small nucleolar RNA-associated protein 20, N-terminal | Interproscan |
| IPR052575 all species → | Family | Small subunit processome component 20 | Interproscan |
| IPR011989 all species → | Homologous_superfamily | Armadillo-like helical | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR17695 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| GO:0030686 all species → | Cellular Component | 90S preribosome | Interproscan |
| GO:0032040 all species → | Cellular Component | small-subunit processome | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K06640 | ATR; serine/threonine-protein kinase ATR | EC:2.7.11.1 | DNA repair and recombination proteins | ko03400 | deepkoala |