Gene detail

Detailed information of ENSOFVP00000025112.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020607704.1, basic proline-rich protein-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000027167

GAGTCAAGCTTACTATTTCTACGGCCATTTTGGTTAACCGGCAACCGTTCATATTTTTGGAACTTTCGGAGATCTTTGATTTCCTGATAGCATTTGAGGAATATCCTAGGAAAGTATGGACACTCTAGATCATAGAGGTTGACTGAAAAGGTGAAACGCAATATTAGTGACAGGGGGAGTCAAACAATCATAAAACAAAAATATgcctcctccccctcctccaCCACCTGGGCCACCACCTCCCCCTGCACACAAGTCCTCTGGTCCACCGCCAAAGTCCTCTGGTAAACCAGCTGACAGGGGGGCCCTGCTCAGCCAGATACATGGAGGAGCCAGGCTTAAGAAGACAGTGACCAATGACCGCAGCGGCCCAGTGGTAGGAGGAAATAAACCAAGTCCGAGTAGTAGCAGTGGAAATGTAGGAGGTGGCGGCGGCGGTGGCGGTGGCATGGGAGTATCTCCTATGGGACTTGGTGGACTTTTTGCAGGAGGAATGCCAAAATTAAAATCGTCTGGAGATAGAGGAAGACCTGGAACAGGAGGAGCCAAAGGACCAGCTATGAAACCACCAGGCTTCAAACCACCTTCACCAAACAATTCCAGTTCATCACTGCCTCCTGCTCCGAGTGGTAATTCAAGACCACTCCCTCCTCCACCAGGTAAAGCCCTAGGCTTTGCTCCTCCACCACCACCCTCAACTATGAAGCCGTCATCATCTGACAACTCTAGGCCTCTTCCACCACCTCCATCGGGAACTGGATCAAGACCATTGCCAGCGCCACCACCAGGGGGAGGACAAAGACCACCAGCTCCACCACCAGGTGGTGGACAAAGACCACCAGCTCCATCACCAGGGGGTGGACAAAGACCACCAGCATCAATGAGGCAAGGTCCTCCACCTCCACCCCCTGGACGAGGAGGGGCGCCTCTGCCACCACCGTCATCTCCAAGAACAACGGCACCTCCACCTCCACCGCCTATGAGAAGTAATCCAAATATGGCTTCTTCACAACCACCTACCCCAAGAGGAGGTCCACCACCACCTCCTCCTTCAAGGGGTGGTCCACCACCTCCACCTCCGAGTAGAGCGCCTCCACCACCGTCATCAAGGCCACCATCACAAGCGCCTCCACCACCACCTCCCAATAAAATTCCCCAGAGGGGGAGTTCTGGACCGCCACCAAGTCGAGGATCAGCTCCTTTGCCTCCTCCTCCAGTAGGAGGGCTAGGACCGCCTCCTCCACCTCCGTCTAGAGGTTCAATGGAGCCTAAGAGATCAGGGCTTCCGCCTCCACCACCACCTGTGTCATCCAATAGATCAAATAACATGATGAACGGACCAACTAGAAATTCACTTCCACCTCCTCCCCCGGAGGCAATGACAAGCTCATTTGAAGAGGACTTTGAATCAAGATTTTCATTTAGTTCAGATCTACCTCCACCAGAGCCTTATGTAGAAACAGCAAAAACATATCCAAGTAAAAATCCAAAGAAGACTGGTGGTGCGAAGTCTTCTGGAAATCCTCCAAGTGGGGTGAGGGCTAATCCACCTCCACCTCCACCATCAAGAGGGGCTCCGCCTCCACCGCCACCTCCTCCAAGGAGATAAGGCATGAGGCATTTGTCAAAGTTTCATAACAATTCTAGGAGGACCAATTTTTTATGATAGTAATTATTAATAACAATGATCCAGATCTGTGGACAGTATTTGGTGGTCTTTATACTGAAGACTCGTTTCATAGTCGTCACTTCTTAAACCTTGTGGCTTAGCGAGGTTGACATTTTTCAACAGTAATATTGACAATCTGTTATCAATAGAGTATGGAATACACACCTATAGACCAATCacttgtgaaaatgaaattaatgttttctattttttttttttgctgtataTGGAGAGGGTGTAGCACCTTTTAGTTATTAGATTTCCTTGTTAAAAGTGGTAGAAACAGGGAAGGTGTTATGTATATCGCAGTATGAAACTTGTGCCATATTTGTGGTTGAAGCAAGTATAGTGTCGATTATTTCAAtaactaataattaataaaaaatgcattttttttgcAGTAGTTAATGACATTATTTGTTGTCATTGTTAAATTATCATTTTAGAAATAAAAGACACCGACATCTTGGAGAAAGAAAAAaccacaacacaaaattaattttaatattattatttctttggaGTAGACAGATATTTCTATATAATTTATCCTTAATACTAAATATTGACAACACTATATACAGTGGAGTAATGTCTCTTAACTCAGTGTTccttctttgtaaataaaatgaaaatttgatGTTAAGttccttctcaaactcattaaggTGGCAAACGCAGTTTTTGGGACCTGTGTTTCATTCTCCGTTTTTTTCCGAAACCCTAAATCCTTTGTTCAGCAAAAAGGCACATAAGTCAACAACACAGACTTTAGCTTTTAGAAACTTTGGCTGTGTGCCATTACCATGGCAAGAGAAATAAATCTATATGGGCCTTTTACAGTGAAGAAAAACCATGAATCAAGACCCTTGTATTTTGACTAAAAATTATCTCTTTTTTTCCAAAGTGGTGCACAACATCATGTTAACAAGTTCCTGC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6IN36	WAS/WASL-interacting protein family member 1 OS=Rattus norvegicus OX=10116 GN=Wipf1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005530 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02205 all species →	WH2	WH2 motif	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003124 all species →	Domain	WH2 domain	Interproscan

PANTHER

No PANTHER signature was detected for ENSOFVP00000025112.1. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19475	WIPF; WAS/WASL-interacting protein	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.