Detailed information of ENSOFVP00000025367.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: KAJ7380139.1, protein with role in RNA processing [Desmophyllum pertusum]
Species Cyphastrea salae · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0VCF9Protein LSM12 OS=Bos taurus OX=9913 GN=LSM12 PE=2 SV=2
Q3MHD2Protein LSM12 OS=Homo sapiens OX=9606 GN=LSM12 PE=1 SV=2
Q9D0R8Protein LSM12 OS=Mus musculus OX=10090 GN=Lsm12 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008737 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09793
all species →		ADAnticodon-binding domainDomainInterproscan
PF21166
all species →		LSM12_LSMLSM12, LSM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047574
all species →		DomainAD domainInterproscan
IPR019181
all species →		DomainLSM12, anticodon-binding domainInterproscan
IPR048478
all species →		DomainLSM12, LSM domainInterproscan
IPR039683
all species →		FamilyProtein Lsm12-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13542
all species →		LSM12 HOMOLOGInterproscan

 Gene Ontology
No Gene Ontology signature was detected for ENSOFVP00000025367.1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23643LSM12; protein LSM12-Circadian rhythm - flyko04711deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP