Gene detail

Detailed information of ENSOFVP00000025490.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: KAJ7379953.1, Sec1 domain containing protein 1 [Desmophyllum pertusum]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q62991	Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1
Q8BRF7	Sec1 family domain-containing protein 1 OS=Mus musculus OX=10090 GN=Scfd1 PE=1 SV=1
Q8WVM8	Sec1 family domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SCFD1 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004423 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00995 all species →	Sec1	Sec1 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001619 all species →	Family	Sec1-like protein	Interproscan
IPR043127 all species →	Homologous_superfamily	Sec1-like, domain 3a	Interproscan
IPR036045 all species →	Homologous_superfamily	Sec1-like superfamily	Interproscan
IPR027482 all species →	Homologous_superfamily	Sec1-like, domain 2	Interproscan
IPR043154 all species →	Homologous_superfamily	Sec1-like, domain 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11679 all species →	VESICLE PROTEIN SORTING-ASSOCIATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0006888 all species →	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0019905 all species →	Molecular Function	syntaxin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000025490.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.