Gene detail

Detailed information of ENSOFVP00000025566.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020616398.1, uncharacterized protein LOC110054353 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8FS75	Large ribosomal subunit protein uL16 OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 GN=rplP PE=3 SV=1
Q6NJC8	Large ribosomal subunit protein uL16 OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309 GN=rplP PE=3 SV=1
A4QBI8	Large ribosomal subunit protein uL16 OS=Corynebacterium glutamicum (strain R) OX=340322 GN=rplP PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006636 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00252 all species →	Ribosomal_L16	Ribosomal protein L16p/L10e	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016180 all species →	Domain	Large ribosomal subunit protein uL16 domain	Interproscan
IPR036920 all species →	Homologous_superfamily	Large ribosomal subunit protein uL16 superfamily	Interproscan
IPR047873 all species →	Family	Large ribosomal subunit protein uL16	Interproscan
IPR000114 all species →	Family	Large ribosomal subunit protein uL16, bacterial-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12220 all species →	50S/60S RIBOSOMAL PROTEIN L16	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0005762 all species →	Cellular Component	mitochondrial large ribosomal subunit	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0032543 all species →	Biological Process	mitochondrial translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000025566.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.