Gene detail

Detailed information of ENSOFVP00000025895.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020608104.1, consortin-like isoform X1 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000027949

GGTGAAGGTAAAATGCCGTGATCAAATGCCCTCTGACTGTCAAGTACTTTTGAAACTAAAGCTGCAAACTGCGTTTGTTTACGTTAAAGGATGAAAAGTAGTGCGGTTGCAGATGTGCAGGTTAATGAAGAAAAGCCTGATAGCAACGTTCAAGATGTAGTCTCCGCTGAAGACGACAAACATAATTCCGATCAAGTCGACCAAAATAAGCTTACTACACAGTCTACAGAAGATGGAAGCGACCTAACCGACCTGTCTGAAGAGAAAATACCCGAGGAACCGCTATCTGACCACGAACGGCATTTACTGTTTGAGAAAGGAATCAAattcaAGAAGAAAGGGAACTTTCAGCATGGTCTCTATTGTCTGCTGGCCTGTGTGCGAGGATTAAAAGATGGATCTGAATTTCAACAACTTCCAGAGTGCCTTCATAATATAGCAGAGATTTACAGCCAACTTGGAGATTATGAGAATGCTGTTTCATTTGCCCAGGCTGAGAAACTTTATTATGAAACATCACTTATCAGTGTTGAAAGTGAACTCCAATCAACACAGAATGAACCAGATAACACTGGCAGCTTCACTGCATCTGACAAGAGTACAGGAGACAAAGTATCCCAGccTGAAGTCAAGGATGATCCACAAGGACAGTCGACTGAGGCTCGGTCAGCAAATGAATATGAGAAGCTAGCACACATGTGCTTGAAGCAGAAAGATGCTCAGCTGGCACTAGAGTATTGTGGCAAGGCTGTAAAACTGCGCCAGTCCATATATGGAGAAGAACATCCCATAACCAAACGTACACTGGATCTTTTCACTGTCATATATGCTGAGATGGGAAAGGAGCAATATACAGCCGCCATGCAGAAATTCAACAAATCTAAGCAGTCTGACGAGGCGAGTCCTGATAAAGCCTCGCAGTCTCCAGAAAGTACTGACTCAGCAAAAGAGAATGTCAAAGAGAATGGAGATGCAGCAGTGGATTCAAGGCCAACCCCTGCTGGAGAGCCTCACGAGGAGGAACGTGAAACGACCACGCCTGAAGCTGAAGCACAAGTAAACAATGAGAATATGAGTATCACGCCAGGTCAAGCAATGCTCTGTTTCTTTCTTATCACTGTTGCTGTAGCTGTTGGCGTGACATTATTTTGCTGTCACGTCAGTGGTAAAGATCCTGTCTCCACCTTTAACTACATCGTCACGCGACTCAAGTTTTACTATTTTTACTATTTCAGAAGAGCTCCTGGAGGGAACAGATATTTCTGATACCCTAGACTCTAGTCTTCAGTGTTATTATTTTTAGGTTTTAATATAATTGCATGTTATTTTATGGTGTAAATTTGACCGAGGAGCACAGTGGTTTGTAGTGAATGCAGTGCATTGATAAGTTGTTTTAACCTGTGTAAAGAGACAGGAAAGGCTCCCGATGTGTGCGAAAGTCAGCGACatttccagaattttttttttttgctgttgtgtCAATAAACGCATTTTACAAACTAGATGAAATGGTACCTGGgaataaatacatgaaaatgGGTTTACTACACGACTGAGAAAATTAGTGCATTGTGATTGACTGAGAACAGGCCAATTCagagttaatttttaatttgcactgcaaAGCAATACAACGGTCGCTCCTTCGTAAATTGCTCAGTCATATAACAATGAGAAATCGTACAAAAAGCCGTACAATTAAGGATTTGAACTACTCCTGATATTTAAAATTACGTTTGCCTTAAGACTCGTGCAGTTTTCAGAGAGTTTGCAATATCGCGCgaagtgtaaatccttaattgcacATGCATTCTTTAATTCGATTACCTAATACTTATtttcaatgaaatgtcatacttttttaaaaaaaatttcacaccATAAAAGCTTCAATATCTTAACttaaaaaatgtacattttagATATTTAATAACACTGTAAATGATGGAGTTGCCAGGAAGTAAATAAAGTACAGGAGATCCTTGTGCTGC

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006627 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR042318 all species →	Family	Consortin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28581 all species →	CONSORTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0030133 all species →	Cellular Component	transport vesicle	Interproscan
GO:0042998 all species →	Biological Process	positive regulation of Golgi to plasma membrane protein transport	Interproscan
GO:0071253 all species →	Molecular Function	connexin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000025895.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.