Gene detail

Detailed information of ENSOFVP00000027265.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020632785.1, proteoglycan 4-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000029351

ATGTCCTCTGACCAcaATCCAGTTCTTCCATTGAGGTCGGAAACTGCAGCGCTATCAAATGATGTTGGAAAAATCAAAACTGAGTTAAGGGATATTCTTACTGAAACTACACGTGTATCACATCAACCAAGAAATCCAATGATATCAAGACCATCAGGTTTTTTGCCATCAGACTCAACACGTCACTTTGCTGATGCAGAGCGTATTCTTCAAGATGTTCAGCATCGGAGAAAAAATCTGGATAACAACGTGGACGCTGTGATAAGGCAAAGAGAAGAACAAGACCTATACAGTCTGGTGGATAACATTCCATGCCAGTTGTATGTAGAGGGAATGATTGTTATAATGTTTTCTTGTCAGAGGGAAATTGACCAGGAAGCCAAAGGTATTTCCCAACAAAATGAAGATACAAATGCTTTGAAGAAGCAAAAGTCTCAGCCAGTCAAGGCTACACCATATGCAGCCagaaaaattgaacaaaaaggCACAACAAGACCTGCCTCTATTACAGGAAAGAAGGCGGTGAACAAAACCACTGGAAAGGAAAATGTGCCAGAGAAGATTGCTGCAAAGAAAGGCAAGGTAAGCAGCAGACAAATTGACTTACTACCCATCATGACCCAAGCCCCTCCAAAACGTCCTACTACAGTGACTCCAGCTCAGAAACAAGTGTACCTGTCAAGTGTGTATGGCCGCCAACCTTATCACCCGCAAAGAACAACCTCCAAGGCACCATACCTACACTACCAGTCTCCTGTGAACCCTAAGACAGCTGCTATCATGGCTGGGATTATGGCCGGTGATAGCAGGGTCACAGCAAAACCAGTTCTACAGGATCTGTCAAGTGTGCCGGAGAAAGAGGTTCTGGAACCAAGAAAGAAAAAGCCAGATGGTGTTAAACCAGAGCTCAGTCCTCGTGTTCAACCAACCAAGCAGAAGGATGATACACAGTATTTTTTTCACCCCAGAGTTGATTTGTCACAAGTTGCACCCGGGGAGGGAAAGGCAAGAGTTGCCGTACCATTGGAAGGCCAGCTGGTTCCTATGGCTATCCCCTTGGGTAAGCCCAAGACTGACCCTGCATTACGGCCCCCTATTGCTATACAAGATGTACAACGTACAATAGAAAGCTCCTCAACAGAGAGCTCCATATCCACAGACACTTCTGAGCCCTCATTACCAGATCCCACTCCTGTTAGACCCAGCAAGCCAACTCGACCAAATGTGGCAGTGATTACAATGTATGACAAGGAAATGGGTGAGAACACAGCCCATCAGCACAAGCGACAGAAAAAATCCCCAGCCAAGAAAAAACAAGGCTCTCTTTCTGTACAGGTATTGCCAAAAGTGGATATCGATAGTTTTTCAGAATCTGGATCCTCCTCACCAAGTCTGCCTCATGTTTCTGGTATTCCAGAGCCTCTTTCTCGTCCTGACGATTCTGAGTACCAGGAATTCAGGAATTTTTTAGCGGTGACAGAGTCTGGGACGCGTGAACAACTTGAAGAACAGGCTTTAGATGATGCGGATGACGACTTTCACCGAATCCCAACCCCTCAGCACCCGCTGACATTAGAGGGATTCACAGGAGTACAAGGGCAACCGTACAATGGGCCCCCTTTTCCTCCCGTTCATCCTCCAGATTCTGTGCAACTTTTAGGGGGCGTCCTGGAAGCTGACACTCGACAAGAGGAAGCTCTGCAAGAGAGAGCTATGGAATGGATCGAGCAGGAACTGTTGGCACGAATTGTTAGTGAAATGAACCAGCCAGCGCCTGACCCTACCACCCTGATTAGACTGCAGTCTACCCCCGACAGTAGCACTGTATCTGAGCAGGAAGATGAAGATGCTGATATGCTTGCTGCCACAATAGGTCTGGGTGGAATTCAGCTCTTTATTGACGCGGGTTTACCAGTGGATCGAGAACTTGTCACCAACTTGATTCGAGAAGTAATAGCGGAAAATATTTCTACAGTTCTTGGTCATCCAAAACCAAGAGCCAGCTCTGCCCCTTCAAGACAGCCAGTCTTGGAGGATGAAAATTCATCACGTACACCTTCCCCCAGGGGGACTCCATTGCCAACCCCCGCACCCACCCCGGAGTACACACCGCCAGTGTCGGAGGAAAGTGCTCATGAATCAGGAATACTAGCAACACCTGAACGCACGCCCACCCCGTCAGTAACGAGTGAAGAACCGACTCCGTCGGATACTAAAGAGgaagaaaacgtttttgaaCCAATCAATGAAGAACCGCCTAAAGAAGAGGAGACAATTGACCAGGTAAGAACACCAGTATCTACTCCAGTCCCATCGCCACCTGCTGCGCAGTCCCCCGCAGTCAGTATATCGACCCCTGAGCCTTCATTCCGAGAGCCAGAGTTATCTCAAGGTACGGTGGTGCCCACGCCTCCACTGTCTGTTGTTGTGAGGACCCCAACTCCGGAGCCTGAACCCGAGCCAGAGCTTAGCATAGCTGAAGAACCGAGTAAACCCACGGAACCATCTGCCAGTCAGAAGGTGCTGACTCCTCCTAAGCCTGCGCAACCTTCGATCAGCAGTCCTTCGAGCATGTCATCTACCACACTGGGTACCACGACAATAACTACTGAGGAGGAGATGTCTGAGGGAGAAATGATACAGCCTTATGTACACGCTGGTATGTACAGTGAAGGGGAGTTTGCTGTGTCACCAACCATTATTCAACTGGCTGCCCAAAGAAATTTGCCTGTGAGTGGAGACTGGGACACTGCAGCCATGTTAGGACATGATGAAGACAGTCGTAACGAGCTGGTGAGAGTCGCTGTCAACGGTATCTTACAAAGTGGAAAAGGCAAACGCCGTGACAGCAGCAGTAGTGTTAGTGAGTCCATGTACCAGGTTAGCAGTGCTAGTACTCTGAGAGATACAGAGGACATCAGAGAGGATTCTATCACTGACGTCACACACAGTGAAGGAGAAGTTCCTGTGCAAGATCCAATGGCGGTTCTTTTGAGCCGCATTCAAAATCATATGAGGTCAGCGGAGAATACTATGGCCAGTGAAGGAGAGCTGTTAACAGAACATCTGCGCACACCCGTAACAACCTGTACTTATTTGCTTCTAGACCTTGGGAACATTTCTCCTGGTGAAGTAGTAGGGGAGCCTCCAGGTGTCATGAGAGAGCTTCACCCCACATCAGCTGACTTCTCACTCGATGACGTTGCTGGGAATAAAGAGCAGATTCCCACAACAGCTCTACATGAAGTTGCACCGATTGCTGCCGACGAAGGGCCGAGTCACGGCGATCGTTCTCTTCATGCGTCAGACTTGATTCCGGGAACACTCGGAACAGACACTGCTTCCCCAGCCCTTAAACAACAGCATGGATCTAAGCCGAGGGTGATTCACGTTGGAGAACGAGAAAGTGAAGCTTCTGGATCACATTCACCAAGGACATTTTCACTTGACGAGCGCCGGAGAGAGATCACTGCTCCTCCTGAAGAAAACGAGAAACGGGATCCAGTAGATGTTAGCGGGTTAGACTTGCCGAGTACGAGGAGTGGAGTGAATGAAGCAGAAGCCAAAGAAATACAACCTCAACAACCCACTAAAATCCAAGTGACTTTGCCTTCAATTGATGATGTTCATGAAGAGAGCTCTCTAGCAAGCGAACATCATGTTTCTATTGAACAAGATACGTTCGGCGATGTGTCATCCATTTCAGGGGGTGATTTCTGA

Transcript

ENSOFVT00000029351

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q1G7G9	TALPID3 protein OS=Gallus gallus OX=9031 GN=TALPID3 PE=2 SV=2
Q9BVV6	Protein TALPID3 OS=Homo sapiens OX=9606 GN=KIAA0586 PE=1 SV=4
H6D7E6	Protein TALPID3 OS=Danio rerio OX=7955 GN=talpid3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002502 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15324 all species →	TALPID3	Hedgehog signalling target	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029246 all species →	Family	Protein TALPID3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15721 all species →	KIAA0586 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007224 all species →	Biological Process	smoothened signaling pathway	Interproscan
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22865	TALPID3, JBTS23; protein TALPID3	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.