Gene detail

Detailed information of ENSOFVP00000027548.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020604277.1, serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000029653

CACACTCCATAGCTTGAAGTTATCTCCAAAAGATTGTTTAGGCCAAGAAAAGGAATCAAAACGTAGTCGTAGGCTCGGAGAAGGAAGCGATCTTCCCTTTTCCATCGGGAAATCGCCAATTTGCTATCCACACGTACCATGGACTCTGTGGAAGCAAAAAGGCCAGGTATTAATCCTGCCCCTGCTACTGCTCATCCAGATCCATTTAATAGAAAGTCTGTTAGGAAACCGCAGAAAGCTGCGCAGAAAAAGCAACAAGGATCGTCTAGGTTTCGGTCCAAACCAAGCTTTGAAATCCAACCTCTTGGTCTTTTGAAAGACTCGGCGCCAGCCGAACAACAGGAATTGTTCATCAAGAAACTTCAACAGTGTTGTGTAGTCTTCGATTTCATGGATCCAGTCAGTGATTTGAAGGGAAAGGAAATTAAACGGGCATGTTTAAACGAACTTGTTGACTATATTGCGTCAGGTCGTGGAGTCCTTACTGAGGCAGTTTATCCAAAAATAATCGAAATGGTCGATGCAAACATTTTTAGGACTTTACCTCCATCAGACAACCCAGACTTTGATCCAGAAGAAGATGATCCAACATTAGAAGCCTCCTGGCCTCATCTACAGATAGTCTATGAATTCTTCCTTCGGTTCTTGGAGTCGGCAGAGTTTCAACCCAGTGTTGCCAAGAAACACATTGATCAGAAGTTTGTTTTACAGCTTCTGGAACTCTTTGATAGTGAAGATCCTCGTGAGAGAGACTTCCTCAAGACTGTCCTTCACAGGATATATGGAAAGTTCCTTGGACTTAGGGCTTACATTCGAAAGCACATCAATCACATATTTTTAAAATTCGTTTATGAGACAGAGCACTTCAATGGGGTTGGAGAACTGCTAGAAATCTTAGGAAGCATCATCAATGGATTTGCTCTTCCGTTGAAGACTGAACACAAGATGTTCTTAAACCGAGTTTTAATTCCTCTTCACAAGGTGAAGTGCCTGGGTCTGTACCATGCGCAGTTGGCATATTGTGTCGTTCAGTTCTTGGAAAAGGATGCCACACTTACAGAAAATgtCGTTTTAGGCTTACTAAAATACTGGCCAAAAACAAGCAGTCAAAAAGAGGTGATGTTCTTAGGTGAAATAGAAGAAATTCTAGATGTAATAGATCCCGCTCAGTTTCAAAAAGTTATGGTACCGCTCTTCAAAAATATCGCTCGATGTGTATCAAGCCCGCATTTCCAGGTCGCTGAGAGAGCGCTTTACTTCTGGAATAACGAATACATCATGAGCCTAATTGAAGAAAACTCGAACTCCATCTTACCGATCATGTTTTCAAGTTTATATAGGATATCCAAGGACCACTGGAACCAAACCATCGTAGCACTGGTCTATAACGTTTTGAAGACCTTTATGGAAATGAACTCGAAACTGTTTGACGAACTAACTTCTTCGTACAAAAGCGATAGACAAAAggaaaagaaaaaggagaaagaaagagaagagcTGTGGAAACAACTCGAAAAGTTGGAAATAGAAACGAGAAATAAGTCAACACCTTTGGCTTCGAATCCCGCGGGTTCAAACCCGAATCCCTCTACCAGTTCGGGAGCCGGGACAACGACTAAGAATACCAAAAGCTGAACTCCCGAGCGCCGCCCGCGGTTGTTGTTTTGTCCAGACCTCCTCCGACATTTTGATTAGTGTGAAACGTGATCCAAGGGAGACTCCGTTCACCAGTGACTAAAAGAAATTATTAATTTCTAATTTGAGGAAGTTGAGCTTCGACTGACCACACCTTCGAAAAGCACGAAAGAATTTATTAATTTAAGATGTCGTATATTGTTCAGACTCGAGGGTTGTTACATACTCTTGTCTTAAGTTACTCACTGCGCGCGGAGGGAGGTGGTAAAAGTGACGCCGAAGCGCCGTTTTATCGTGTAGTTTGTTTAATGTGGTCGGTCGTTGGGCGCACGGCGCGTTCGATTCCGTCTTGATTACGTTGTCGGTGGTCATTTGTTGCCTTTCGTCGTCCGGTAGTACAGTGACATTGTCTTACTATAAATGTGTGTATTACTGGCGTAGAACGGTCATTGtcgaccgaaaaaaaaaaaacctccctTCAGACGAAACGGATACCTCAAGGCCTGGATGATATTGAAGTttagggaaaaaaaatatactTGTAATCGAATTCTGTAGATAGTCCTTCCCTGACAAGAAGCCTCGCCCGCAAAACAGTATTATGGCGTCAATTCAACCTAGATGGTCGTCGCAAAGGCAGAACAGGTTCCAATAATTATCACGAAACCAATTTACTCCAAAAAGCTCAGAAAACGTAACCTATTGAAAAGAGATTCGTTTGCAAATTCAGCGCAGAAGGTCCCAATTGCAAAATTAAAACCGAGAGCATTGCTTTGCAGACGAGGTTTCTCAGTAAATTTTGCAACCCTATTTCTCTAGCAATTTTCCTTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PD03	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r5a PE=1 SV=1
A4FV68	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform OS=Bos taurus OX=9913 GN=PPP2R5E PE=1 SV=1
Q16537	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform OS=Homo sapiens OX=9606 GN=PPP2R5E PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001884 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01603 all species →	B56	Protein phosphatase 2A regulatory B subunit (B56 family)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002554 all species →	Family	Protein phosphatase 2A, regulatory B subunit, B56	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10257 all species →	SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000159 all species →	Cellular Component	protein phosphatase type 2A complex	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0019888 all species →	Molecular Function	protein phosphatase regulator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0072542 all species →	Molecular Function	protein phosphatase activator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11584	PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.