Gene detail

Detailed information of ENSOFVP00000027956.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020622903.1, 28S ribosomal protein S6, mitochondrial-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P82931	Small ribosomal subunit protein bS6m OS=Bos taurus OX=9913 GN=MRPS6 PE=1 SV=4
P82932	Small ribosomal subunit protein bS6m OS=Homo sapiens OX=9606 GN=MRPS6 PE=1 SV=3
Q9VZD5	Small ribosomal subunit protein bS6m OS=Drosophila melanogaster OX=7227 GN=mRpS6 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009149 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01250 all species →	Ribosomal_S6	Ribosomal protein S6	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000529 all species →	Family	Small ribosomal subunit protein bS6	Interproscan
IPR014717 all species →	Homologous_superfamily	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Interproscan
IPR035980 all species →	Homologous_superfamily	Small ribosomal subunit protein bS6 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21011 all species →	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0070181 all species →	Molecular Function	small ribosomal subunit rRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000027956.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.