Gene detail

Detailed information of ENSOFVP00000028011.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020618360.1, ubiquitin-protein ligase E3A-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000030155

GTCACAAATTTGAGATATAAGGCCACAGATATCAGTAAAATAATCAAAGTCTATCACTCACCGCCTTCCGATCTTTGTCCTATTTATGTTGTTCAAGAATATTCCTCCTGTCGTTTTGTGAAATCAAAGGAGGAGAGCGGAGCTGAAATGGACGACGTTTTGACTAGTCATGCTGTAGTACCTGGTAGACCGCCGAAAATTCCAATGGCGCATTCGAAAAGACACTCACTGCAGTCTGGAGACTCCATAACAAAATTTAACAAGCTGAAGAAACATTCAAGCCAACCGAAGCTACGAAAAAATGTGCTTGGCGGATCGCTTGCGagcttaaacttggagaactcgAGGAAATATTCCAGTCTCGCTCAGATTAACGTGCAGACTTTGAAGGCCAGCGCAAAGACTTTAAGCGCTAGTAATCTTGCTGCCATTTCAGACTCGAATCTTTCGCTGAAGGAAGCTATGCCGCCACGGAGCTACGATCAGCCAAATTCCTCCTTCGCCGAAGTCAAGAGCCATTTTGAAGATATGGTGAAATGCTATTTTCAGCAACTTACCAAGGGTTGTGGGAACCAgaactgtcaaaacaagttttgtttttccagcaAAGGAGGGGTCAGATTCTCTCCTGATGTGGCTGGAATTATGAGCATTGAATTAGCTACGCGAAGTAAACAGTATTTATGCATTTCTAAGAACCAAAAAATGGCACCTTTACCAACAAAACTATTTGATGGAGAACCAAACAAGCCAAGACCATTTCTACACTGTTTGTTTTCAACTTCACCATTTCAAACACTTTTCCAACCATGTTCCCAAACTCAGAAGAGAAATTCTGAGCAAACTTTGAGTCTGTCGATCCAGATGACTGAGCCCAACAGAATATTTGAAAATCATGTGGCTGGATCTTCAGGTAAACATAATTCTAAACCTGAATTTGATGATGGTGTAGAGAAGTTGACACCTGTTGCTGGTAGTGATGGTAAATGTCTTGTGGCTGTTGGCAGTGGTAAAAAAGGACTGAATTTGCAAGCATCCAAAGTCAGAGAGGAGCCCgcaaaaaaacatgttttcacGCTTGATGCTGAATTTTCCAAGGTAAATTTGTCTGGCAATCTAATGAATGACCATGCTCTTCCTGGAATGCCAGCAGAACTGTTTAGCTCAAACAGCTCGTTAAATGACATAATTGACTTGGAAGAGTTTGAGAAAGAGTGTGCCCTCGAAATGTCATCTGGTCACATTCAGGAGTTCTCCTTGACTCATCTAACATTACCAATGCTCGAATCTTCCATTCAAAATTATAATCAGTGTCAAGATGCCGCTTTTCTTATCAACACCATCCGGACAGTATTTACATCATCTGAAGCACTGAATGACAGTTTTAGGACAGCTAAAGGGGAATACCATGATTCCCTAGACATTCCTGCTGTGAGAGAAGCATACAAGCTTCTTTTAGGTCTGGAACCCCAAAATACGTTTGTGTTGCCACTACTGAATGCTTTAGAGATTCATCTTACTGCACTAAGTTCCTTGATCATCAACCCTGATGAGGTTGCGCAGCTAGTAATTCTAGCAGAGAACCCTCTCATTCATGAGTCACAGACACTTCTATGGAAACTGTGCCTGGTGTTGAGCAAACTACCAGTCGACTCGAGGCAAGCCTTGATTAATATTTTCACCTCTTACAATGTGGATTCCTTCAAGCATCTGATTCAGGTTTTTCAGATGTACTTGAGCAGCCTTGTCTCACCTGGTCAGTGCAGTAAACCACACTTGATGGAAGCTTGCAAGACTCTAGCTATACTCTATGACACCTGTCATCAGCTCAACGAGAGAAGCAAAAAAGAATTTGCCCCCCTTTCAGAGTTCTATAATGAAGATCTCTCTTTAAAAATAGATTTTAAGAAAGAATACGAAATGTGGGGAACTTCAAATGAAACTAAAAGATTGCAAAGGGATCAAAAGTTATCTCTTCTTGATTTTCCATTTCTGCTTGACCCGACTTCAAAGGTACGAGTACTCAAGATTGATGCTGTATCCCAAATGAGAGTTGAGTACCAAAACGCTATCGTCCATCAGGCGCGTGTGCAACAAGCACAGAGACTACTGGAAGAAGTTCAGAGTGAGGCAGATGAGTTGGAAGATGCTGTTAAGTCTGCTATGTGCCCATTTCTTGTCTTAGAAGTTCGCCGCGATCACCTGATTGAGGATACGTTAAACCAGATCCACCTCAAGGAGTTTGACCTGAAGAAACCACTGAAGATAAAGTATGTTGGTGGGGGAGAACAGGGGTTAGATATGGGAGGACTACAAAAAGAATTCTTCCACATGATCGTTGAAGCTGTCTTTGATCCTGGTTACGGAATGTTCTCCTACATAGAAGAAAGTCGCTGTGTGTGGCTCAACAGTTCGTCTCTTGAATCTGAGAAGGAATTCGAACTGGTTGGGATTCTTCTTGGCTTAGCAATCTACAATGGCATCATATTAGATGTACATTTTCCACTTGTGATTTATAAGAAGCTTCAGGGAGAGAAGCTAGGCCTGCAGGACTTAAAGAACATTCAGCCGTCCCTGGCCAAAAGCTTGCAAGAGTTACTGGAATTCGAGGGTGATGTCGAAGACACATTTTGCTACACATTTCAGgTTTCTTCAAGTGAATTTGGTAACCTTCAAAGTGCAGAACTGCTCCCTAATGGTGCGAACATTTCTGTGACAAACAGCAACAGAGAGCAGTTTGTTTCACTCTATGTCAATCATCTCCTTGTTAAATCTGTTCAACGACAGTTCCAAGCCTTTTCACGGGGATTTCACAAGGTCTGTGGAGGTCAAGTGCTGACCCTGTTCCGCCCTGACGAACTAGAGCTTCTGATCTGCGGCTGTCCGGTGATCGATTTCCACGAGCTTGAGGTCGCAGCTACCTACGACGAAGGGTACAGCCACACCCATCCCACCATCATCATGCTCTGGAAAGTGGTCAATGAAATGACCGTGGAACAGAAGAAAGCGTTCCTCATGTTTGTCACGGGAAGTGACAGAGTGCCTCTCAAGGGCCTGGTCCACTTGACGTTTATCGTTCAACGCCATGGCGAAGACTCCGACAGGCTTCCGACAGCTCTAACCTGTTTTAACAGGCTTCTGTTGCCTGAATACAGTAACATAGAGAAGTTGAAGGAGCGGCTCATTGTCGCGATTGAAAATTGCAAAGGCTTTGGGCTTACCTAA

Transcript

ENSOFVT00000030155

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q05086	Ubiquitin-protein ligase E3A OS=Homo sapiens OX=9606 GN=UBE3A PE=1 SV=4
O08759	Ubiquitin-protein ligase E3A OS=Mus musculus OX=10090 GN=Ube3a PE=1 SV=2
Q15034	Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens OX=9606 GN=HERC3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006932 (this species only)
Ubiquitin family	E3\|E3 activity\|HECT · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632 all species →	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan
PF16558 all species →	AZUL	Amino-terminal Zinc-binding domain of ubiquitin ligase E3A	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000569 all species →	Domain	HECT domain	Interproscan
IPR035983 all species →	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR044611 all species →	Family	Ubiquitin-protein ligase E3A/B/C-like	Interproscan
IPR032353 all species →	Domain	Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain	Interproscan
IPR042556 all species →	Homologous_superfamily	Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45700 all species →	UBIQUITIN-PROTEIN LIGASE E3C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000028011.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.