Genomic Location: chr6:4128662...4145633
NR annotation: XP_020605617.1, paraspeckle component 1-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families
| CDS |
| ENSOFVT00000030170 |
| Transcript |
| ENSOFVT00000030170 |
| Protein |
| ENSOFVP00000028025.1 |
| UniProt accession | Description |
|---|---|
| Q5ZK88 | Paraspeckle component 1 OS=Gallus gallus OX=9031 GN=PSPC1 PE=2 SV=1 |
| Q1LZD9 | Paraspeckle component 1 OS=Bos taurus OX=9913 GN=PSPC1 PE=2 SV=1 |
| Q4KLH4 | Paraspeckle component 1 OS=Rattus norvegicus OX=10116 GN=Pspc1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003464 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08075 all species → | NOPS | NOPS (NUC059) domain | Domain | Interproscan |
| PF00076 all species → | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 all species → | Domain | RNA recognition motif domain | Interproscan |
| IPR012975 all species → | Domain | NOPS | Interproscan |
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23189 all species → | RNA RECOGNITION MOTIF-CONTAINING | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
ENSOFVP00000028025.1.
