Gene detail

Detailed information of ENSOFVP00000028238.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020613048.1, tetratricopeptide repeat protein 28-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

ENSOFVT00000030396

cttacttacttaaTAGGCgacagggcaggagaaggaggcgcctatggcaatcttggcaatgTTTATCGACgacttggcgattttaaacaagccataaagtaccacgagcaacatctcagcattgctaaagaagtgggtgacagggAAGGAGAAAGACGCGCCtatggcaatcttggcaatgcttatcgacgacttggcgattttaaacaagccataaagtaccacgagcaagatctcagcattgctaaagaagtgggtgacagggcaggagaaggaggcgcctatggcaatcttggcaatgcttatcaaggacttggcgattttaaacaagccataaagtaccacgagcaagatctcagcattgctaaagaagtgggtgacagggcaggagaaggacgcgcctatggcaatcttggcaatgcttatcgaggacttggcgattttaaacaagccataaagtaccaAGAGCAACGTctcagcattgctaaagaagtgggtgacagggcaggagaaggacgcgcctatggcaatcttggcaatgcttatcaaggacttggcgattttaaacaagccataaagtaccacgagcaagatctcagcattgctaaagaagtgggtgacagggcaggagaaggaggcgcctatggcaatcttggcaatgcttatcaaggacttggcgattttaaacaagccataaagtaccacgagcaagatctcagcattgctaaagaagtgggtgacagggcaggagaaggacgcgcctatggcaatcttggcaatgcttatcaaggacttggcgattttaaacaagccataaagtaccacgagcaacgtctcagcattgctaaagaagtgggtgacagggcaggagaaggacgcgcctatggcaatcttggcaatgcttatcgacgacttggcgattttaaacaagccataaagtaccacgagcaagatctcagcattgctaaagaagtgggtgacagggcaggagaaggaTGCGCCTATGGCAATCTTGGATGTGCTTATCAAAgacttggcgattttaaacaagccataaagtaccacgagcaagatctcagcattgctaaagaagtgggtgacagggcaggagaaggacgcgcctatggcaatcttggcaatgcttatcaaggacttggcgattttaaacaagccataaagtaccacgagcaCGATCTTagcattgctaaagaagtgggtgacagggcaggagaaggacgcgcctatggcaatcttggcaatgcttatcaaggacttggcgattttaaacaagccataaagtaccacgagcaCGATCTTagcattgctaaagaagtgggtgacagggcaggagaaggacGCGCCTATGGCAATCTTGGCTATTGTTATTATGGTCTTTCGAATTTCAGAAGAGCCGTTGAGTTTCATAAGCAACACCTAAGCATTGTtcaagaagtgggagacaggaGAGGACAACTAGCTGCCTATTTACTCTTCGGTGATATTCAACGCGGTGTTGGCGATCTGACGAGAAGCATAGAGTACTGTCTAAGAAGTCTCAAGATTGCGGAAGAGATAGGGGACAGGAGTGGCAAGGGGAAAGCGTATTGTCGTCTAGGAATAAACTACCTACGACTACGTGATTTTAAACTAGCTAAGAAATACCTCAAGCTGCATCTTCACGCTTCTAAAGAAATAGGAGATTCCTGCGGAGAAGGATGTGCATATACTCATCTAGGTCGGAGTTTTGAAATGTCAGGCTGTTTGATGGAGGCTTTGCATTGTTATCAATGCAGCGTTAATGTTTTTAATGGAATAAGACTGCTTCTTGAGTTTGAAGATACCTGGAAAGTGAGCTTTCGGGATCTGCATCAGGGAGTGTACACCAGTCTCTTCAGGGTTCTGTTGAAGCTTTCCATGCCTGACGAAGCCTTAAGTGCCGCTGAACAGGGACGAGCCCAAGCTTTGATGGATCTCATGGCATCAAATTATGGCCTTGAATTGCTCCATCCTTTGTCTCTTGAACATAAAGAAATGATATCAAACATAGCAAGGGATACCTCCTCTCAAATAGTTTTTGTAGCACTCGAGGGTACCACGATAAACTTATGGGTACTCAGCAAAGGAAAAGATGTTCACTTTACACAGAACGATATAAAAGATAGAGATGCCTTAAGCTTTGTAAAAAGCTTAACACAAGCTGCTTTCAAAGAATACAAGTGTGGTCGTTCCTTGGGATTGCAGAGAGGTGATCTACAGCCTACGAAAGCTTCTCGTCAAACAGAACAGTCATGCTGCCAGAACAATTCCTTGCAAGTTTTGTATCGTAGCATTTTCAGCCCCATCATGAAGTTTCTAAAGAGAGATGAACTAATCATTGTCCCAGATGGTCCACTAGGCCTTGTTCCTTTTTCTATGTTTCCCTCGTGGTGCTTAAGCTTAAACATAATTTTCATTAGATACTAG

Transcript

ENSOFVT00000030396

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000014 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13176 all species →	TPR_7	Tetratricopeptide repeat	Repeat	Interproscan
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR052386 all species →	Family	G-protein-signaling modulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954 all species →	LD33695P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15837	GPSM2; G-protein signaling modulator 2	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.