Genomic Location: not available for this species
NR annotation: CAH3135841.1, unnamed protein product [Pocillopora meandrina]
Species Cyphastrea salae · all data for this species · gene families
| CDS |
| ENSOFVT00000030499 |
| Transcript |
| ENSOFVT00000030499 |
| Protein |
| ENSOFVP00000028331.1 |
| UniProt accession | Description |
|---|---|
| Q05048 | Cleavage stimulation factor subunit 1 OS=Homo sapiens OX=9606 GN=CSTF1 PE=1 SV=1 |
| Q99LC2 | Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1 |
| Q5R8K2 | Cleavage stimulation factor subunit 1 OS=Pongo abelii OX=9601 GN=CSTF1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002738 (this species only) |
| Transcription factor family | Homeobox · all TF in this species |
| Transcription factor family | CUT · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02376 all species → | CUT | CUT domain | Domain | Interproscan |
| PF00046 all species → | Homeodomain | Homeodomain | Domain | Interproscan |
| PF16699 all species → | CSTF1_dimer | Cleavage stimulation factor subunit 1, dimerisation domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001356 all species → | Domain | Homeobox domain | Interproscan |
| IPR038184 all species → | Homologous_superfamily | CSTF1, dimerization domain superfamily | Interproscan |
| IPR003350 all species → | Domain | CUT domain | Interproscan |
| IPR010982 all species → | Homologous_superfamily | Lambda repressor-like, DNA-binding domain superfamily | Interproscan |
| IPR051649 all species → | Family | CUT Homeobox Domain-Containing Protein | Interproscan |
| IPR032028 all species → | Domain | Cleavage stimulation factor subunit 1, dimerisation domain | Interproscan |
| IPR009057 all species → | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14057 all species → | TRANSCRIPTION FACTOR ONECUT | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0000978 all species → | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
ENSOFVP00000028331.1.
