Genomic Location: chr5:24781276...24882152
NR annotation: XP_020616742.1, nuclear RNA export factor 1-like isoform X5 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families
| CDS |
| ENSOFVT00000030541 |
| Transcript |
| ENSOFVT00000030541 |
| Protein |
| ENSOFVP00000028370.1 |
| UniProt accession | Description |
|---|---|
| P58797 | Nuclear RNA export factor 1 OS=Coturnix japonica OX=93934 GN=NXF1 PE=1 SV=1 |
| Q9U1H9 | Nuclear RNA export factor 1 OS=Drosophila melanogaster OX=7227 GN=sbr PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003681 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09162 all species → | Tap-RNA_bind | Tap, RNA-binding | Domain | Interproscan |
| PF12799 all species → | LRR_4 | Leucine Rich repeats (2 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015245 all species → | Domain | Nuclear RNA export factor Tap, RNA-binding domain | Interproscan |
| IPR032675 all species → | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR025875 all species → | Repeat | Leucine rich repeat 4 | Interproscan |
| IPR030217 all species → | Family | Nuclear RNA export factor | Interproscan |
| IPR001611 all species → | Repeat | Leucine-rich repeat | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10662 all species → | NUCLEAR RNA EXPORT FACTOR | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0006406 all species → | Biological Process | mRNA export from nucleus | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0016973 all species → | Biological Process | poly(A)+ mRNA export from nucleus | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
ENSOFVP00000028370.1.
