Detailed information of ENSOFVP00000028497.1 in Cyphastrea salae

Genomic Location: chr6:3744129...3759254
NR annotation: RMX58501.1, hypothetical protein pdam_00010743 [Pocillopora damicornis]
Species Cyphastrea salae · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O73872Superoxide dismutase [Cu-Zn] OS=Danio rerio OX=7955 GN=sod1 PE=2 SV=1
Q52RN5Superoxide dismutase [Cu-Zn] OS=Bos mutus grunniens OX=30521 GN=SOD1 PE=2 SV=3
P00442Superoxide dismutase [Cu-Zn] OS=Bos taurus OX=9913 GN=SOD1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000985 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00080
all species →		Sod_CuCopper/zinc superoxide dismutase (SODC)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024134
all species →		FamilySuperoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperoneInterproscan
IPR036423
all species →		Homologous_superfamilySuperoxide dismutase-like, copper/zinc binding domain superfamilyInterproscan
IPR018152
all species →		Binding_siteSuperoxide dismutase, copper/zinc, binding siteInterproscan
IPR001424
all species →		DomainSuperoxide dismutase, copper/zinc binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10003
all species →		SUPEROXIDE DISMUTASE CU-ZN -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005507
all species →		Molecular Functioncopper ion bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0005777
all species →		Cellular ComponentperoxisomeInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006801
all species →		Biological Processsuperoxide metabolic processInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04565SOD1; superoxide dismutase, Cu-Zn familyEC:1.15.1.1
Pathways of neurodegeneration - multiple diseasesko05022deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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