Gene detail

Detailed information of ENSOFVP00000028835.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020624058.1, 39S ribosomal protein L20, mitochondrial-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B3CLK2	Large ribosomal subunit protein bL20 OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) OX=570417 GN=rplT PE=3 SV=1
Q3YSX0	Large ribosomal subunit protein bL20 OS=Ehrlichia canis (strain Jake) OX=269484 GN=rplT PE=3 SV=1
Q2GHR2	Large ribosomal subunit protein bL20 OS=Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas) OX=205920 GN=rplT PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005439 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00453 all species →	Ribosomal_L20	Ribosomal protein L20	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005813 all species →	Family	Large ribosomal subunit protein bL20	Interproscan
IPR035566 all species →	Homologous_superfamily	Ribosomal protein bL20, C-terminal	Interproscan
IPR049946 all species →	Conserved_site	Large ribosomal subunit protein bL20, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10986 all species →	39S RIBOSOMAL PROTEIN L20	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0000027 all species →	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0005761 all species →	Cellular Component	mitochondrial ribosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000028835.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.