Gene detail

Detailed information of ENSOFVP00000028872.1 in Cyphastrea salae

Genomic Location: :...
NR annotation: CAH3150415.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSOFVT00000031122

atggttattgatgttttcagtaaatacggttggattgtaccattgaaggatgagaaaggtgaatctgtcgctgaagcgttcaaaacaatattcaaggaaggcagaaaaccacaatatctatgggttgataagggtaaagagttctataacaaacatgtgaaggacttgtttgagaaaaatgggatacatatgtactcaactgagaatgaagagaagtcatcagtagttgaaagatggaacaggacaattaaatccaaaatgtggaaacagttcacagttcaaggtaatacaatgtatctcgacatgctccccaaactagtaaatcagtacaacaacacaaaacattcaagcataaaaataacaccaattgaggcgtcaaagaaaaagaatgaaggaactgtttacttcaatctatatggtgaaatggaaacattaaaacagaaaccaaaattcaaaacaggtgataaagtCCGAATAtcaaagtacaaacggaatgtgttagataaggaaatccctgaagcgttacaatcatcaaaagagcaaatcttgaactttgtggctcaatggatatctgaaggttctggttggacaattgaatctgttgacaatcatcatctcaacattgtaaaatataaacctatgaaaggctcttcatatattaaacttccacaagaactcagaaacagcataaagggattgattaatataaaaaatgaagacaatgaatgcttcagatggtgtcatatcagaCATTTAAATCCTCAAGATAAAGAcccacagaggatcaaaaaatcagaCAAAGAATATGTTAAAAATTTAGATTATTCAGGAATTGAATTTCCAGTAACAACCAAACATTATaataaaattgagaagcaaaatgagattaaTATCAATGTATtgggatatgaaaacaaacaaccatatcccatctttgtgtcaaaagaaaaatacgaaGACCATATAGAACtgttattgataactgaaaatgaaaataaacattacATACTCATCAAAGATTTCAATAGGTTTATGTTCAACCAAACAAAACATGAACATAAAAAGTACTTCTGCATGTCTTGTttgcaatgtttcagctctgaaatagtcctaaaaaatcataaaaacaaTTGCATTCAAGTAAATGGTTcacaagcagtaaaaatgcctgacaaaaacaacaatatactgaaattcaataattttcataaacaacaacctgtgccatttgtgatctatgcagaTTTTGAAGCCATAATAGAAAAGATctctggttgtcaacctaaaAATAATGACTCATATACAGAGTCTTATCAAAAACACACAGATTGTGGATATGGTTACAAACTAGTTTGCTGTTATGATGATCAATACAGTAAAGACACACGAATTTATAAGGGTgagaaggctgtgtataaatttttAGAAGCCATGTTGAGAGAAGTCGACTATTGCAagagaataataaaaaaagaattcaataaaccgttaaaaatgacaaaaagagatgaaaaagaatttcaaaaagctgatgAATGTTACATTTGTAATAAACAATACACCAATGAAGACATCAAAGTTCGTgatcattgtcatatcactGGAAAATACCGCGGTTCAgctcatcaagaatgtaatttaaaacttaggataaaaccagaagaaattaaaataccagtcatattccataatttgagaggttatgacagtcattttatcATGCAAGAGATTGGAGCTATTGTTAAGAATCATGCATATAAAAATAAGAAAGGAGAAGATAAACAGATGAATATCAATGATATTccaaataatatggaaaaataCATGGCATTCATGCTTGGCAATCACTTGAcatttattgacagtttccaattcatgagttcAAGTTTAGAAAAGCTAGTAAGCAATATGCCAAAAGAATCATTTAAATACACCTCCGAATTATTTGAAGGGAAAGAGTTTGATTTGATGGTTCGAAAAGGAGTATATCCATATgattatatggacagttttgataaattcaatgaaaagctaccatcaAAAGAAGAATTCTACAGTTTGTTAAATGATGAACATATATCCAATGAAGATTATGAACATGCTCAAAATGTATGGAATATATTCTCTctaaaaaatatgggtgattaccataacttataccTTGAGTCTGACGTACttctattagctgatgtattcgaaaacttcaggaagacatgtcttgaatattataaACTAGACCCATGTCATTATTTTACATCTcctggtttgtcatgggatgctatgttgaagatgactaacATCAAACTAGAACTCATGACTGatgttgatatgtttcaattcattgaaaaaggattacgtggtggaatcagctgGCGCTATATTGCCAATCGTTATGGTGAGGCaaataataaatacatgaaaacaTATGATAATAATACTCCATCAAaatatatcatgtatcttgatgctaataacctttaTGGATGGGCAATGAGTCAGTGTTTGCTAACTGGTAGattcagatggatgacacaaaaacagattgataagatgaaATTATCCAAGTATGAAGTAGACAGTAAGAAAGGTTTGATATTAGAAGTTGATTTAGAATATCCTGAAAAgttgcatgatcttcataatgactatccattagCTTCAGAAAAATTAACAGTAACAAAGGACATGCTTTcaccttattgtaaaaaaatagcagagaaatatgggatatcaattggtttagttcaaaaactcataccaacactcagtaaaaaagaaaactatgtccttcattatcgaaacttgcaattatatctTGATCTTGGCCTCAAAATAACTAAAATTCATCGAGTTCTTGAATTTAATCAAACTCCATGGCTTAAACAGTATATTgacttcaatacagaaaaaagaaagaatgctaaaaattcttttgaaaaagatttcttcaaacttatgaataatagtgtatttggtaaaactatggaaaatatcagaaaaagaGTTGATGTTAGACTTGTCACTGATGataaaaaactattaaaactaaccagtaagccaacttatgtcaGCAGCAAgatattcaatgaaaatcttGTTGCCGTTcataaaatcaaagaaacattaaCATTAAACAGACCAGCTTATGTTGGTATGTGTATATTAGATTTGAGTAaaactttgatgtatgatttccattacaattatatcaaagaTAAGTATGGTAATAAAGCTAAGTTATTGTTTACAGATACTGATAGCTTAACTTATGAAATTGAAACTGATGATGTATAcaaagacttttggaatgataaagataaattcgataacagtgattactctgaAAGCTCAATatattttgacaaaacaaataaaaaagtcatTGGTAAATTTAAAGATGAAGCAGCTGGATTACCTATTTATGAATTTGTTGGATTGAGATCAAAAATGTATAGTTATATTAAAAATGATCATAAAGGAGGAAAGACTGCTAAAGGAATTAAAAAGAATGTAATTAAAAAAGATATCacacatgaaaattacaaacaaacactttttaataatcaacagatgtatcataagatgaaaacaatcagaAGTGAGAATCATCAGTTGGGAAGTTATGAAATAAATAAGGTATCACTAagttgtttcgatgataaaagatatatttctgatgatggaataactagttatgcttatggtcataaaaatataatttaa

Transcript

ENSOFVT00000031122

Protein

Uniprot

Uniprot term	Description
P34457	Putative uncharacterized transposon-derived protein F54H12.3 OS=Caenorhabditis elegans OX=6239 GN=F54H12.3 PE=5 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02945	Endonuclease_7	Recombination endonuclease VII	Domain	Interproscan
PF03175	DNA_pol_B_2	DNA polymerase type B, organellar and viral	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038563	Homologous_superfamily	Recombination endonuclease VII superfamily	Interproscan
IPR004211	Family	Recombination endonuclease VII	Interproscan
IPR044925	Homologous_superfamily	His-Me finger superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR004868	Domain	DNA-directed DNA polymerase, family B, mitochondria/virus	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31511	PROTEIN CBG23764	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003887	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006260	Biological Process	DNA replication	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan