Detailed information of ENSOFVP00000029040.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020620097.1, LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase listerin-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
E1C231E3 ubiquitin-protein ligase listerin OS=Gallus gallus OX=9031 GN=LTN1 PE=3 SV=1
A0JM49E3 ubiquitin-protein ligase listerin OS=Xenopus tropicalis OX=8364 GN=ltn1 PE=2 SV=1
Q6A009E3 ubiquitin-protein ligase listerin OS=Mus musculus OX=10090 GN=Ltn1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003807 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639
all species →		zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039804
all species →		DomainListerin, zinc finger, RING-typeInterproscan
IPR039795
all species →		FamilyE3 ubiquitin-protein ligase listerinInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011016
all species →		DomainZinc finger, RING-CH-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12389
all species →		ZINC FINGER PROTEIN 294Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0043023
all species →		Molecular Functionribosomal large subunit bindingInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0072344
all species →		Biological Processrescue of stalled ribosomeInterproscan
GO:1990112
all species →		Cellular ComponentRQC complexInterproscan
GO:1990116
all species →		Biological Processribosome-associated ubiquitin-dependent protein catabolic processInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000029040.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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