Gene detail

Detailed information of ENSOFVP00000029205.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020604221.1, periostin-like isoform X1 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000031515

ATGGCGAAGTTATTGTTGTTTTACTTGCTCGTTCTTAGTTCTTCGTTAGAGCTTAGCTTATCATCGAATTGGTGGAGTCCATATAAGTGGCGAGAATACTGGGAAGATTGGTGGCAGAAACTTGACGTTGGTCAAAACGAAGGAATTCTACAGCCACAACAGAGCAAACCAGAGATTTTACCGAGTGGCGAAGGGCCAAATGTTTGTACACATCGGATTCCCATAGGAATATTTCGAAAATGCAGGAAGATACCCGGAAAACGGAGACTTCAATGCAGGACCGAACAGCATTATGTGACACAATATCGGTGCTGTCCCGGATATACCCAAGTGGAAGGAAGTCCCGGATGTCCAAAAGaactataCACttcaaacaagaaaataatggaGGTGGCGGAGTCCCTTGGCCTGGGTGAATTTACAAAACTAATGAAGGCTTCTGGTCTTGCGTCTGAGTTGGACTCTGACACGCGTTACACGGCATTTGTACCATCAGACCAAGCGTTCTCTGCCTTGCCATCAGAAACTTTAGAAGAGCTTGCTAATAATAAAGAGATGCTTCGCGAAACGCTTCTGCTGCATTTGGCGGCTGGAAAGATTGTCACTGAAACGATGAAAGACAACAGAAAGATAACAACACTAGACGGCTCGCAAGAACTGCGTATCAACGTGGCGGAAGACGGAGAGACAATCGTGGTGCAAGGAGGAGAAATTGTTGTCTCGAACCAAGGAGCAAGTAATGGAATCATTCACGTTATTGACAGAGTTCTGAGACCAGCCGTCGGTAGCATTGGAGACATTCTAAAGAGCGACCCAAACTTCAGTATCTTTTCACAAATGATCGAGAATTCCGCAATGAACTTCACCAACATGACCTTGTTCGCACCAACCGATCAGGCTTTTGAAGTGATGGACCGCGAGAGACTTGAAAACCTTCTTTCCAATGAGGAATGCGTTGAGAAATTTGTCAAGTACCACATGCTACCCAAGCCAACTTACACCGCCGCGCTGGACAACGGTCGCTACACCACTGTGGAAGGACATTTCGTCGATGTTAAACTAAGTGGCGAAGGACAGATGGAAGTAAACGACGCTAAGGTGGCGAATGCTGATGTCAGTGCCAATAATGGAATCATTCATACCATTGACAAAGTACTCATGCCTGtttcagCCATGAATCTCTTGGAAGTTGTCAAGGTATTGAACCTCACAACACTTATAAAGTACCTGGATGCCACCGGCCTTTCCACCACTTTAAAGGACGAACAGGGGCCGTTTACGCTGTTTGCTCCAACTGACAAAGCTTTCGATGCTTTACCAGAGTCAACCAAGCAATCCCTGCTTGATGATCCTGCCAAACTCAAGGAACTGCTTGCTTATCACATGATTCCTGAGAGGAAGTGGACCTACGAATTTGGGAAGGATTTGCTGGTGAATTCTCTTAACGAGCCCGACAAACTCCGTCTTAATTCATTCAGATATGGCAAGGTACACTCCGTCAACGGCGCATGCGTAACTAAAGCCAATATTGAAGCCTGCAATGGAGTCATCCATGTTATTCACAAAGTGCTGCTACCACCAACCAAAACAATCTACGACGTCATCAATTCTGATCCTCGCTTCCTAACACTCGTGGAGGCCATAAACCTCACAACCCTCGCGCCAGTCCTCAAGAACCCAGCCGCTTCGTTAACTTTGTTCGCGCCAACGAACTGGGCTTTCGCCGCACTTGAACTCAAGTCTCCTGGATCCATGGAAGGTCTTCTCGCTTACCCCGAAGAGCTGACAGAAGTTCTTCAGCATCATTTGGTAAACGGGACGCTGTACACGTGCGGCATTCACTGCAAATTCAGCTACTGGTCGCTGTTCAGCAACCATTTCTCCGTGTTTTCCACGGCTCGTGGCGTCCTTAAAGTACGCTACGGCTGGAACGGACGAGTGTATGTCAATGGCATGCGCATTATCGACCTTGATCTACCGGCAACGAATGGAGTTATTCACGTGATTGACAACTTGTTGGAGCTGTATCCACAGGGATACCGCAAACTAAAGCGTCAAGCGCACACTCACAGGGCGAGTCGCGGCAAAAAACGGCGCTTACAGTAA

Transcript

ENSOFVT00000031515

CACGTAGAAAGCAATCCAAATGGCGAAGTTATTGTTGTTTTACTTGCTCGTTCTTAGTTCTTCGTTAGAGCTTAGCTTATCATCGAATTGGTGGAGTCCATATAAGTGGCGAGAATACTGGGAAGATTGGTGGCAGAAACTTGACGTTGGTCAAAACGAAGGAATTCTACAGCCACAACAGAGCAAACCAGAGATTTTACCGAGTGGCGAAGGGCCAAATGTTTGTACACATCGGATTCCCATAGGAATATTTCGAAAATGCAGGAAGATACCCGGAAAACGGAGACTTCAATGCAGGACCGAACAGCATTATGTGACACAATATCGGTGCTGTCCCGGATATACCCAAGTGGAAGGAAGTCCCGGATGTCCAAAAGaactataCACttcaaacaagaaaataatggaGGTGGCGGAGTCCCTTGGCCTGGGTGAATTTACAAAACTAATGAAGGCTTCTGGTCTTGCGTCTGAGTTGGACTCTGACACGCGTTACACGGCATTTGTACCATCAGACCAAGCGTTCTCTGCCTTGCCATCAGAAACTTTAGAAGAGCTTGCTAATAATAAAGAGATGCTTCGCGAAACGCTTCTGCTGCATTTGGCGGCTGGAAAGATTGTCACTGAAACGATGAAAGACAACAGAAAGATAACAACACTAGACGGCTCGCAAGAACTGCGTATCAACGTGGCGGAAGACGGAGAGACAATCGTGGTGCAAGGAGGAGAAATTGTTGTCTCGAACCAAGGAGCAAGTAATGGAATCATTCACGTTATTGACAGAGTTCTGAGACCAGCCGTCGGTAGCATTGGAGACATTCTAAAGAGCGACCCAAACTTCAGTATCTTTTCACAAATGATCGAGAATTCCGCAATGAACTTCACCAACATGACCTTGTTCGCACCAACCGATCAGGCTTTTGAAGTGATGGACCGCGAGAGACTTGAAAACCTTCTTTCCAATGAGGAATGCGTTGAGAAATTTGTCAAGTACCACATGCTACCCAAGCCAACTTACACCGCCGCGCTGGACAACGGTCGCTACACCACTGTGGAAGGACATTTCGTCGATGTTAAACTAAGTGGCGAAGGACAGATGGAAGTAAACGACGCTAAGGTGGCGAATGCTGATGTCAGTGCCAATAATGGAATCATTCATACCATTGACAAAGTACTCATGCCTGtttcagCCATGAATCTCTTGGAAGTTGTCAAGGTATTGAACCTCACAACACTTATAAAGTACCTGGATGCCACCGGCCTTTCCACCACTTTAAAGGACGAACAGGGGCCGTTTACGCTGTTTGCTCCAACTGACAAAGCTTTCGATGCTTTACCAGAGTCAACCAAGCAATCCCTGCTTGATGATCCTGCCAAACTCAAGGAACTGCTTGCTTATCACATGATTCCTGAGAGGAAGTGGACCTACGAATTTGGGAAGGATTTGCTGGTGAATTCTCTTAACGAGCCCGACAAACTCCGTCTTAATTCATTCAGATATGGCAAGGTACACTCCGTCAACGGCGCATGCGTAACTAAAGCCAATATTGAAGCCTGCAATGGAGTCATCCATGTTATTCACAAAGTGCTGCTACCACCAACCAAAACAATCTACGACGTCATCAATTCTGATCCTCGCTTCCTAACACTCGTGGAGGCCATAAACCTCACAACCCTCGCGCCAGTCCTCAAGAACCCAGCCGCTTCGTTAACTTTGTTCGCGCCAACGAACTGGGCTTTCGCCGCACTTGAACTCAAGTCTCCTGGATCCATGGAAGGTCTTCTCGCTTACCCCGAAGAGCTGACAGAAGTTCTTCAGCATCATTTGGTAAACGGGACGCTGTACACGTGCGGCATTCACTGCAAATTCAGCTACTGGTCGCTGTTCAGCAACCATTTCTCCGTGTTTTCCACGGCTCGTGGCGTCCTTAAAGTACGCTACGGCTGGAACGGACGAGTGTATGTCAATGGCATGCGCATTATCGACCTTGATCTACCGGCAACGAATGGAGTTATTCACGTGATTGACAACTTGTTGGAGCTGTATCCACAGGGATACCGCAAACTAAAGCGTCAAGCGCACACTCACAGGGCGAGTCGCGGCAAAAAACGGCGCTTACAGTAAACACAACTGAAGTGTCCTCGCTTTGACTTGCCTATAAGAAACGCAAATGCAATTCTACCTGTTTGATATAAAATTTTGACAATTCGAAAAACACACGCTTCAGACGATTCTTGCATACCTTGAAACTTTACGATCATAGCAGAGGTTTATCTTTTATGTAAATTGACTGCAAAGCTGACATATCCTCAGGTATGATGAAGAATTAAACAAATTAATCACGCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P82198	Transforming growth factor-beta-induced protein ig-h3 OS=Mus musculus OX=10090 GN=Tgfbi PE=1 SV=1
P55906	Transforming growth factor-beta-induced protein ig-h3 OS=Bos taurus OX=9913 GN=TGFBI PE=1 SV=2
Q15582	Transforming growth factor-beta-induced protein ig-h3 OS=Homo sapiens OX=9606 GN=TGFBI PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002465 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02469 all species →	Fasciclin	Fasciclin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000782 all species →	Domain	FAS1 domain	Interproscan
IPR036378 all species →	Homologous_superfamily	FAS1 domain superfamily	Interproscan
IPR050904 all species →	Family	Cell adhesion and biosynthesis-related protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10900 all species →	PERIOSTIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan
GO:0030198 all species →	Biological Process	extracellular matrix organization	Interproscan
GO:0031012 all species →	Cellular Component	extracellular matrix	Interproscan
GO:0050839 all species →	Molecular Function	cell adhesion molecule binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19519	TGFBI, BIGH3; transforming growth factor-beta-induced protein	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.