Gene detail

Detailed information of ENSOFVP00000031189.1 in Cyphastrea salae

Genomic Location: :...
NR annotation: CAH3120600.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9D554	Splicing factor 3A subunit 3 OS=Mus musculus OX=10090 GN=Sf3a3 PE=1 SV=2
Q12874	Splicing factor 3A subunit 3 OS=Homo sapiens OX=9606 GN=SF3A3 PE=1 SV=1
O46106	Splicing factor 3A subunit 3 OS=Drosophila melanogaster OX=7227 GN=noi PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13297	SDE2_2C	Replication stress response SDE2 C-terminal	Domain	Interproscan
PF16837	SF3A3	Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9	Domain	Interproscan
PF12108	SF3a60_bindingd	Splicing factor SF3a60 binding domain	Domain	Interproscan
PF11931	SF3a60_Prp9_C	SF3a60/Prp9 C-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025086	Domain	SDE2-like, C-terminal domain	Interproscan
IPR031774	Domain	SF3A3 domain	Interproscan
IPR021966	Domain	Splicing factor SF3a60 binding domain	Interproscan
IPR024598	Domain	Splicing factor SF3a60 /Prp9 subunit, C-terminal	Interproscan
IPR000690	Domain	Matrin/U1-C, C2H2-type zinc finger	Interproscan
IPR051421	Family	RNA Processing and DNA Damage Response Regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12786	SPLICING FACTOR SF3A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12827	SF3A3, SAP61, PRP9; splicing factor 3A subunit 3	-	Spliceosome	ko03041	deepkoala