Gene detail

Detailed information of ENSOFVP00000032139.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020609955.1, meiotic recombination protein DMC1/LIM15 homolog [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14565	Meiotic recombination protein DMC1/LIM15 homolog OS=Homo sapiens OX=9606 GN=DMC1 PE=1 SV=2
Q61880	Meiotic recombination protein DMC1/LIM15 homolog OS=Mus musculus OX=10090 GN=Dmc1 PE=1 SV=1
P37384	Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM15 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001822 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08423 all species →	Rad51	Rad51	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR013632 all species →	Domain	DNA recombination and repair protein Rad51-like, C-terminal	Interproscan
IPR020587 all species →	Domain	DNA recombination and repair protein RecA, monomer-monomer interface	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22942 all species →	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000150 all species →	Molecular Function	DNA strand exchange activity	Interproscan
GO:0000730 all species →	Biological Process	DNA recombinase assembly	Interproscan
GO:0000794 all species →	Cellular Component	condensed nuclear chromosome	Interproscan
GO:0003690 all species →	Molecular Function	double-stranded DNA binding	Interproscan
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0006312 all species →	Biological Process	mitotic recombination	Interproscan
GO:0007131 all species →	Biological Process	reciprocal meiotic recombination	Interproscan
GO:0008094 all species →	Molecular Function	ATP-dependent activity, acting on DNA	Interproscan
GO:0042148 all species →	Biological Process	DNA strand invasion	Interproscan
GO:0070192 all species →	Biological Process	chromosome organization involved in meiotic cell cycle	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006259 all species →	Biological Process	DNA metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10872	DMC1; meiotic recombination protein DMC1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.