Gene detail

Detailed information of ENSOFVP00000032253.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020603312.1, methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000034904

TGGTTAAACTTAGCTGGTGGACAATTCGACGGACAGGGTATTTCTTCGGGTTATTGCTGTTAATCAATTGAAAATTGAGATGAGTAGTTCAAGGGTATTACAGCAAAGCGGCAGACGAACCTGTCGAATACTGGTAGCCCAGAGGCACCGATACCATGATCTCTCAAGGGCAAGTGTCATCGGAACTGCTGTTGAAAAATCCCCAGAATTTGAGGAGAACAAAGCAAAGATGGCTGCTGCTGTTCAAGACTTGAAAAACACAGTTAACAGAATTAAGCAAGGTGGAGATGAAAAGGCACGGAAAAGGCATACTTCAAAAGGGAAAATGTTACCTAGAGACAGAATATCCTGCTTGCTTGATCCTGgATCTCCATTTATGGAATTATCTCAGTTAGCTGGTTTCAAGTTGTATGATAGTGAAGAAGTACCTGCTGGCAGCATTATAACTGGCATTGGTAGAGTATCAGGAGTGGAATGCATGATTGTTGCAAATGATGCGACGGTCAAAGGTGGAACATATTACCCTATAACAGTTAAAAAGCATGTAAGAGCTCAAGAAATTGCCCAGGAAAACAGATTACCATGTATTTACCTTGTTGATTCAGGTGGAGCTAATCTTGCAAGGCAGGCTGAAGTCTTTCCGGATAAACTTCATTTTGGAAGAATATTTTACAATCAAGCAATCATGTCATCCAAGGGAATCACTCAGATAGCAGTTGTCCTTGGCTCTTGTACAGCCGGAGGTGCTTATGTACCAGCCATGGCTGATGAAAGCATCATTGTTAAACAACAAGGAACAATCTTTCTTGGGGGACCACCATTGGTAAAAGCTGCTACTGGTGAAAATGTATCTGCTGAGGAATTGGGTGGTGCTGATTTACATTGCAAaACATCAGGTGTGACAGATTACTATGCTGTTGACGATTTTCATGCCCTTCATCAAGCCAGGCAATGTGTCAAGAACCTGAACATCAAGAAGACCTTGCCAGTCACAGCAGAAACTATTGAACACCCTTTGTATCCATCTGATGATCTTTATGGCATTGTAGGGGACAACTTAAAGAAGTCTTTTGATGTCAAAGAAGTGATTGCAAGGATTGTTGATGGAAGTAAATTTGATGAGTTCAAGGCAATATATGGAGAGAGTTTAGTAACAGGTTTTGCTCGAATTCATGGCTATCCGGTTGGGATCATTGGCAACAATGGAGTGCTGTTTTCTGAATCTGCACTTAAGGGAACACACTTTATACAGCTCTGCTGTCAACGTAAAattccactgctatttttgcAAAATATCACAGGTTTTATGGTAGGCAAGGACTATGAAGCTGGTGGTATTGCCAAAAATGGTTCCAAAATGGTCACAGCTGTATCCTGTGCTCAAGTTCCTAAGATAACTGTTATTATTGGTGGAAGCTTTGGAGCTGGAAATTATGGCATGTGTGGTCGTGCATATGGCCCTCGTTTTCTGTACATGTGGCCAAATGCTCGCATTTCAGTTATGGGAGGAGAACAGGCTGGTACAGTACTAGCGACTATTACTAAAGACCAGAGGAGCAGAGAAGGCAAAGAGTTGACTGCAGAAGAAGAGGATCAAATTAAAGCTCCCATAATCAAGAGATTTGAAGAGGAAGGTCACCCTTATTTTTCATCAGCAAGatTATGGGACGACGGTGTCATCGACCCAGTGGACACACGGACAGTCTTGGGACTCAGTTTAAGTTCAGCCTTGAATGCGCCAATAGGGGATCCTAAATTCGGAGTGTTCAGAATGTAAACACAGGCAGCCCGGGCTCACGATATGAGCACCAAATGGGCTGTTTGCCTGCGAGCTTTtattagcttttatttgttggAAAGGGCGGAATACATTATAATGCTGTCCTTTAAAACAAAAGTGTGAAGACTGACCGCAAGCAAACAGTGCATTCGGCGTTCTGCAAATAACTATCCCGATGGTGACATGATGTAAGATACAAGAAACTTCATGCCTAAACCAGGCATCAAACCAAAACGTTATTTAACAGTCATTTAGTTGTCGACAAGCTGTTTGCAAAGGACTCGTATTTGGAGCGTAAGATGTTTTGGCTATCAATTAAACGTGGACATGGCTagcaaattt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5XIT9	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1
Q3ULD5	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus OX=10090 GN=Mccc2 PE=1 SV=1
Q9HCC0	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens OX=9606 GN=MCCC2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001323 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01039 all species →	Carboxyl_trans	Carboxyl transferase domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011762 all species →	Domain	Acetyl-coenzyme A carboxyltransferase, N-terminal	Interproscan
IPR029045 all species →	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR011763 all species →	Domain	Acetyl-coenzyme A carboxyltransferase, C-terminal	Interproscan
IPR034733 all species →	Domain	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Interproscan
IPR045190 all species →	Family	Methylcrotonoyl-CoA carboxylase beta chain MCCB/AccD1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22855 all species →	ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016874 all species →	Molecular Function	ligase activity	Interproscan
GO:0004485 all species →	Molecular Function	methylcrotonoyl-CoA carboxylase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006552 all species →	Biological Process	L-leucine catabolic process	Interproscan
GO:1905202 all species →	Cellular Component	methylcrotonoyl-CoA carboxylase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01969	MCCC2, accD1; 3-methylcrotonyl-CoA carboxylase beta subunit	EC:6.4.1.4	Valine, leucine and isoleucine degradation	ko00280	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.