Gene detail

Detailed information of ENSOFVP00000032257.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020619380.1, methionine aminopeptidase 1-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000034908

TGTAAAGATCATGGCGACAGTGGCGACAAGGAATTGTGAAAGTGTTGGCTGTGGACAGCCAGCAAAGCTACAATGTCCTACTTGTATTAAACTTGGTATTCATGGAAGCTTCTTCTGTTCTCAGGATTGCTTCAAGCAATACTGGAATGAACACAAGAAAGTGCATAAGACAGCTAAAGCTACAATAAAGGATATGAAGCCAGTGAACTACAATCCCTGGCCTGGGTATAAATTCACAGGAGTATTGAGACCTTGGTCCCAGTCTCCTAGGAGAGAGGTACCAGACCACATCCAGAAACCAGACTATGCAGAAACTGgtgttcCTCTGTCAGAAATCAAATCCAAGCAAAGCATGCAGATTAAAGTTCTTAATGAGGAGGAGATTGAGAAAATGCGTGTGGCATGCAGATTGGCAAGGGAAGTAATGGATACTGCTGCAAGAAATGTCAAAGTTGGGATCACCACTGATGAACTGGACAGGATTGTTCATGAGGCTTGTCTAGAGAGAAACTGTTATCCATCCCCACTTAACTATCATGGATTTCCAAAGTCTTGTTGCACATCTGTCAATGAAGTTATTTGTCATGGCATTCCTGACATGAGACCCTTGGAGAATGGCGATCTCCTGAACATTGACATCACTATATATTACAATGGGTTTCATGGAGATCTGAATGAGACATACTTTGTTGGTGAAGTGGATGAAGAGAGCAAACAACTGGTCAAGGTGACTTATGAGTGCATCAACCAGGCCATAGCAGCAGTTAAGCCTGGTGTTAAATACAGAGAAATTGGTAACATAATTCAAAAGCATGCCCAAGCACACGGCTTCTCTGTGGTGAAGAGTTACTGTGGCCATGGAATTCATGAGTTGTTCCATACTGCACCAAGTGTTCCTCATTATTCAAAAAATAAAGCTATTGGTGTTATGAAGCCAGGACACACATTTACCATAGAACCAATGATTTCACAAGGAACTTGGCGAGATGAGATTTGGCCTGATAACTGGACAGCAGTTACACAGGATGGCAAGAGATCGGCTCAGTTTGAACAGACCTTGCTAGTGACGGACATCGGATGTGACATCCTGACTCTGAGACCTGACGACAACGGACGAGCTCACTTCCTGTCTCAAATGTAAACTGCCCAAGCTACTAAAGTTGCCTTGTAAAGAGAGTACAAATCATGTGTGAATGAAGCAACTATAAATGTCACGCTAGTGTTAGTTGAAGCCATCTTCCAAACATTTCCGCTGACTAAAGAAAGACGTTCGGATCAAAAGAAATCTTTCTAGTGTGTAAATTTCCTagactatgtttttttttttttctgtggagttttttctttttttgcgaatTTAGGAAATCATTCAGTGTCTTAGTACCTGCATTATACACCATATTAAGTTTCCATATCAAGCTTTAAGACTAGTTCAGTTATTAAGAAAGAACACCATATCGCTGTGTGTTCCTGGCACGTCAGGGTCTAATTCAGGATCATGGCATtttatttttctgcttttcttaaATTTCCTTGTGGTTTTCAAGGTGGCTCAAGATGTCCATTGGCCTGTCTTGTCTTTCTATGACGGCTGGCGTCAGGATGCTGGTAAAACCAGTGATCCGTGGTTTGTTTAACAGAATTAGCTGAAACTGCCTAATCTTGAAATCATGAAAACTATTCGGTGAAGCCTTCAAACAGGTGTGAGTTAAGCGGGTGCTGCTAGAAAAAATAAAACTCGTGTCTGACGTACTTGTATTTCCATGTCAAAACTATTTTCAGTTGAATTCAGTTGAATGTTCACTTCAATATTGTTTTTGCCATGTGAACGAGGCTAATCTAGAATTTAATTACTAGTCTATGGTTCGATTCCGTTGAAAGTTGATTACAATCTCATTTATGTGGCTGAAAGTCATACAGGACATGTCAATTTTGTGGTCAAGGTCATCTATTATCTTGAAAAAATAAGCTTGTCTCGGATCGTgtcctagcctgttccaggttcTCGGTCAGTGAGGACGCTCGAAAAAGCGAGCGGGCGACAAGCGGGATCAGCGGCGAGCGGGATCCGGGAGACCTCTCATTTTTCTCTACCAGAGCCCGCTCGTCACCCGCCCACTTTTTCAATCGTCCGCACTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4QRK0	Methionine aminopeptidase 1 OS=Danio rerio OX=7955 GN=metap1 PE=2 SV=2
Q5ZIM5	Methionine aminopeptidase 1 OS=Gallus gallus OX=9031 GN=METAP1 PE=2 SV=1
Q5I0A0	Methionine aminopeptidase 1 OS=Xenopus tropicalis OX=8364 GN=metap1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001690 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15801 all species →	zf-C6H2	zf-MYND-like zinc finger, mRNA-binding	Domain	Interproscan
PF00557 all species →	Peptidase_M24	Metallopeptidase family M24	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031615 all species →	Domain	MYND-like zinc finger	Interproscan
IPR001714 all species →	Family	Peptidase M24, methionine aminopeptidase	Interproscan
IPR000994 all species →	Domain	Peptidase M24	Interproscan
IPR002467 all species →	Family	Peptidase M24A, methionine aminopeptidase, subfamily 1	Interproscan
IPR036005 all species →	Homologous_superfamily	Creatinase/aminopeptidase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43330 all species →	METHIONINE AMINOPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0035551 all species →	Biological Process	obsolete protein initiator methionine removal involved in protein maturation	Interproscan
GO:0070006 all species →	Molecular Function	metalloaminopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01265	map; methionyl aminopeptidase	EC:3.4.11.18	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.