Gene detail

Detailed information of ENSOFVP00000033394.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020620606.1, leucine-rich repeat and IQ domain-containing protein 1-like isoform X1 [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000036209

GAGGCCTTACCAGACCTTCGGAATTTAGATGACAAGGTTATGCACGTTGAAAGCAAGGTCACAGATAAAAACCAAGCTATATTTATTGCCATGTGCCAGAGTCAACTCCAATCGCAAGATGCCTTAAGGGCAAGGCTTGAAAAGGAAATTGGCAGTGAGGACACACAAAGAAGAGATCCAGAACGCGTTTTAACAAGACTCAATTTAATGAGTCAACACAACCAAGAACGTTTTCAATTGGCTGTGAAACATCTGCTAGAACATGAGAATTTTAGCCCAGATATACTGCATCGTGTAGTGAAGGAAGAGAGACCTCCAGACCTCCACACAGCTATGCAGAAGACAACTGAATCACGCGTGAACCAGGACATCGAGCAAAGAAGAAGAGATTCTCTGGATCCTATAAAAGAACGGCACGTTGCTGCAACCAAGATCCAGGCAGTGTGGAGAGGATGGTACATCAGGCATTTGATTGATGTCAACACCGCCAAGTGGTTTGCAGCTGTGACCATCCAGGCAGCATGGCGGGGCCATTTAGTTCGTTCACAACTGCAACGACAACCTGTAGAGCCATGGGATCCGCAGCGAAATTTAGCAGCTACTGTAATACAGGCACATTTCCGTGGTCAGAGAGTTCGCCGCCGTCTGAACGAAGCTCTGAGAGCAGCTCAGTTCTATGATGACGAGGGGGAAGAAGAATTTGATTACGACGAAGAAGTGGATTTGGCGGCGTTTGATTTTGACGAGAGCGCCTTGGAACAGGGATGGACACCCAGTGAAACTCCACAGCTTCCCTCAAGGGGACCAGTGTTAAAGCTACCCGGGGAGTCATCAAAGACATTCCGTCAAAAGAATTCCAAAACCGATTACCAAAGGGATGTCTCAAACGAATCCACGGTACCAAGACCCCGCCATGCCTGGCGGTCAGCAGATTCGCCCATCACCGATGTCAATCAACTACCTGTCGGCAAGGCAATCATAGATCACGATCAGATGTCGATGACGTCAGGAGTGCAAAGTCACGTGTCGCATCGAGCGGAGGAGCTGACCAACGAGTGGGGTTTCAGAAGTTCTGAGACTGCAGAGCTTATGATGAGAAGAGCAAAGAAGATGAAATATAATCCCGCGAGAAGAAAAAAGCTTCTAGATCCCAACAAACGCTTGGCGCTATTCAAGAAGCTAGAGGAGACCAACAAGTTACGTGACGTGAAGCCACCACCCACTAGAAGACAGCCGCCAAACAGAGTGGATTATTTTGCCGCTCGTGAAGCCATGGCAAGTCATTTGAGTTCTACATTACCGGCCACAGAACAACACAACAGAGAACAAATGACGTACAGCTGGGTTTACAAACAAGCTGTCGTACACGAGGACGAAGAGAAAAACATCATGGCCGACCGCAAAGAATACTCACCAGATAACAGGACCAAGAAAAAAACCTCGCCACAGAAAAATAATCGTTCTCCTGTCAATCTGCCGCACATGGACCCTGTGGTGCTGTCTGGACGCACCCTTCCTCTCATATCGAGTCCACACTTCTCTCAGTCGCTGGAACAAACATCATCTGCAGGACCTTCTCCAAGGAGAAATTCCTTATCTTCAGAGCGTCGCGTGCGATTTCCCGCCATCAAAACTCATTCCGTGCCCAACCTCCTAGCCAGGTCCTCGGCCAGCGGAGAACAGCCAGTGAAAACAGAGAAGAGCAACAGTGCGGGGGCGAGAATCAACAGAGACTCAAGAAACAAGAGATGACAGCAATCCTTACTGAAACCTCATGGTTTACAAGATTCCTGTCAGTCTGTTCATCCTGTGCGTTAGACGTAATTCTAACACGAGCCTGCTCAAAGCTACGGTATAAACAGAAAAGATAGCAGACGAAAAGCTCTGTGGACTTTCTCAATATTTAAATAGATAAGACGATAGTTTTTCTTGTCATCTCTGTTAACAGACTTCAGTTGCTTTATGTTTTACGATGTAAAAATGATCAGTGACGACTTAATGTACAATTGGAAAAGGAAATTGTTTCTGAAAAGGTGTAAGTATGACAAGCGATTCACTCGTTTTTGTGCGGGAAATGCacttttaattcattttaaGTGTTTCCTGGAACAAATTAATATTCACA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96JM4	Leucine-rich repeat- and IQ domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LRRIQ1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003666 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00612 all species →	IQ	IQ calmodulin-binding motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000048 all species →	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051185 all species →	Family	Abnormal Spindle-like Microcephaly-associated	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22706 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000278 all species →	Biological Process	mitotic cell cycle	Interproscan
GO:0000922 all species →	Cellular Component	spindle pole	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0007051 all species →	Biological Process	spindle organization	Interproscan
GO:0051295 all species →	Biological Process	establishment of meiotic spindle localization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000033394.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.