Gene detail

Detailed information of ENSOFVP00000033783.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020626610.1, sorting nexin-14-like isoform X1 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000036645

AACCCCTTCATAGGAAAATGTGCTCCCCCGTTCATTTTCGTACAAGTCAAACCCGTTTCtatatgaaaggttttgcactGAGACTCGTTTCGAAACAGAGGCATAAGGTAACTCAGAAGTGGCCCATTCTTTTGCTGTGTTTGTCTCTTCTTTAAATATATAAAACTGGAAAGACGTTGTTAGTTTTTTGGGATTTTAAGGATTTTGAGCTGGAAAATGATAATGAAGAAATAGAAGAGGCGGTAGAAAAAGAATCACGTGACCTCAGCAGGTGGGAGGTGACGATACCACACGTGATCATGGAAACTAAACAGAAATGCATGTTTATCATATCAGTTGAAAGAGCCGATGTCACTGAAGCTTCCCGATGGGATGTTGCCAGGCGATATAACGAATTCTTTGTTCTTCAGAGCAAGCTAAAAGAATTTCATGGTTCCATAGATGACTCCCTTCTTCCATCCAAACGCAATTCTTCAAAATCTATCTCACAAAAGAGTACAATTGCGTACTTTGAAGCTTGTCGAGTTCAGTTTGAGAAATATGTAAAGtattTGTGTTCTAATCCCCTGCTCAAAGGAAGTGCCCTGTTGTTCAACTTCTTTTCTCCCGACAAGGAATTCAGCAACATGTTTGGTCCTGATAAAATGGGCGACATTGCGGGAAAAAAGTTCAAGTCCATGACAACAATACTCAAGAAAGAGAAAGGCCAGAACCTTGATCCTTTTCTGCAAGCATTTTTATCTTCTACCGTGGAACCAACAAAGCGAAAACCACTACCAAAAGGCCTTTTAGATCAGTCTAAACGAAGTGAGGAGGGGCTATTTCCAGGAAGAAGAAAAACCTCGAGTAGTTCAATGCGCTTAAAAGCGGAAGCGACAGGCAAGCCGCAGCTACAAGTCACCGGCGTTACTGATTATATTCTCTACCTTGCTCAGCGGCTGTTTACTGTTCCAGCCTGGTTATACAGCTTGCTAGTTTGTGGAAAAGTCGCCTTTCAACAGACCCTTGATGTATACGCCGACAGATATTTAGCTGGTAAAGTGGATTTGTTAACAAACGAGCATCGCCTGGTTATGATCATCCACTCACTAAGAGATGCAATCTTCTTTGATCAAGATCCCCCGAGAACCGATACACAGAAGTTAGAAAGACGCGAACAGACAGTGAAAGAAATGCTGGATTTCATTCCAGACGTGGCTGTACGAGTGATAGGCACGGAAAGACACAAGTCCGGTATCACGTTACTCTTTGAGCTGCTACAACAACCCAGGTTAAATAAACAGCTGGCCTATGTTCTTCTGGATTGTGTGATGGGAGAGGTCTTCCCTGAACTAAAAGAGAGCATGTTATTCCCAGCAGACGAACTCCCAAGTCGTTGCTGAATGGTTGAGGTGAAGACTGGTCTAACTCCCCCTCCACACTACACCGgagcaatttgaaaacgtagctttatctctcctgttaggcctaccgtccacactaatctgtGACGAATACGGAACTTTTCAAAAACGCTTTCAAACTGGAGGAATGTGAAAACGTTGGCTTTGCGCTTTAGTGTAGACGGAGAACATTTAAAAATAGAGCTTTACGAAAGCGATACCGTTAAGATAATCATGAtatagcagctctcgtaagggTCTCACATAAATAGCTTGATATCCTTTGGGAGAGCAAtagaaaaaacaacagaaacaatagCCCTAGCgccaaaacaataacagctgctaataatgaagagaattacaagcttacgagagctgctaaaCTTCTGTGATATTCCTCAACCGCAATCCTAACGTGTCGGAATATTGttgcgttttaaaattcctccggTTAGTGTGAACGGCCCTAAGCGTCGAGTGAAGcgaagccgctacagtttttcCCAGCCAACGAAAATATTGCAAAAGTGTGTGATAGAATAAAGAAGGCCTGAGTACGTAACTGGCAAGAGAAAAACAAATCtgttaaacattttaaaaagtttttgaaGTCTAATGTACGTGTGGTTGCGAAAGTATGTCTATAAACAAACCAAATCTtcacaaataaataaaattgttttaatttatattttatacGAAAAAATGGTATCACTCATAATTGTGAAATAAAATGATTTATAGAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BHY8	Sorting nexin-14 OS=Mus musculus OX=10090 GN=Snx14 PE=1 SV=2
Q5R903	Sorting nexin-14 OS=Pongo abelii OX=9601 GN=SNX14 PE=2 SV=1
Q9Y5W7	Sorting nexin-14 OS=Homo sapiens OX=9606 GN=SNX14 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003138 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00787 all species →	PX	PX domain	Domain	Interproscan
PF08628 all species →	Nexin_C	Sorting nexin C terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001683 all species →	Domain	Phox homology	Interproscan
IPR036871 all species →	Homologous_superfamily	PX domain superfamily	Interproscan
IPR013937 all species →	Domain	Sorting nexin, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22775 all species →	SORTING NEXIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18470	ARHGAP1, CDC42GAP; Rho GTPase-activating protein 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.