Gene detail

Detailed information of ENSOFVP00000033783.1 in Cyphastrea salae

Genomic Location: :...
NR annotation: XP_020626610.1, sorting nexin-14-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSOFVT00000036645

AACCCCTTCATAGGAAAATGTGCTCCCCCGTTCATTTTCGTACAAGTCAAACCCGTTTCtatatgaaaggttttgcactGAGACTCGTTTCGAAACAGAGGCATAAGGTAACTCAGAAGTGGCCCATTCTTTTGCTGTGTTTGTCTCTTCTTTAAATATATAAAACTGGAAAGACGTTGTTAGTTTTTTGGGATTTTAAGGATTTTGAGCTGGAAAATGATAATGAAGAAATAGAAGAGGCGGTAGAAAAAGAATCACGTGACCTCAGCAGGTGGGAGGTGACGATACCACACGTGATCATGGAAACTAAACAGAAATGCATGTTTATCATATCAGTTGAAAGAGCCGATGTCACTGAAGCTTCCCGATGGGATGTTGCCAGGCGATATAACGAATTCTTTGTTCTTCAGAGCAAGCTAAAAGAATTTCATGGTTCCATAGATGACTCCCTTCTTCCATCCAAACGCAATTCTTCAAAATCTATCTCACAAAAGAGTACAATTGCGTACTTTGAAGCTTGTCGAGTTCAGTTTGAGAAATATGTAAAGtattTGTGTTCTAATCCCCTGCTCAAAGGAAGTGCCCTGTTGTTCAACTTCTTTTCTCCCGACAAGGAATTCAGCAACATGTTTGGTCCTGATAAAATGGGCGACATTGCGGGAAAAAAGTTCAAGTCCATGACAACAATACTCAAGAAAGAGAAAGGCCAGAACCTTGATCCTTTTCTGCAAGCATTTTTATCTTCTACCGTGGAACCAACAAAGCGAAAACCACTACCAAAAGGCCTTTTAGATCAGTCTAAACGAAGTGAGGAGGGGCTATTTCCAGGAAGAAGAAAAACCTCGAGTAGTTCAATGCGCTTAAAAGCGGAAGCGACAGGCAAGCCGCAGCTACAAGTCACCGGCGTTACTGATTATATTCTCTACCTTGCTCAGCGGCTGTTTACTGTTCCAGCCTGGTTATACAGCTTGCTAGTTTGTGGAAAAGTCGCCTTTCAACAGACCCTTGATGTATACGCCGACAGATATTTAGCTGGTAAAGTGGATTTGTTAACAAACGAGCATCGCCTGGTTATGATCATCCACTCACTAAGAGATGCAATCTTCTTTGATCAAGATCCCCCGAGAACCGATACACAGAAGTTAGAAAGACGCGAACAGACAGTGAAAGAAATGCTGGATTTCATTCCAGACGTGGCTGTACGAGTGATAGGCACGGAAAGACACAAGTCCGGTATCACGTTACTCTTTGAGCTGCTACAACAACCCAGGTTAAATAAACAGCTGGCCTATGTTCTTCTGGATTGTGTGATGGGAGAGGTCTTCCCTGAACTAAAAGAGAGCATGTTATTCCCAGCAGACGAACTCCCAAGTCGTTGCTGAATGGTTGAGGTGAAGACTGGTCTAACTCCCCCTCCACACTACACCGgagcaatttgaaaacgtagctttatctctcctgttaggcctaccgtccacactaatctgtGACGAATACGGAACTTTTCAAAAACGCTTTCAAACTGGAGGAATGTGAAAACGTTGGCTTTGCGCTTTAGTGTAGACGGAGAACATTTAAAAATAGAGCTTTACGAAAGCGATACCGTTAAGATAATCATGAtatagcagctctcgtaagggTCTCACATAAATAGCTTGATATCCTTTGGGAGAGCAAtagaaaaaacaacagaaacaatagCCCTAGCgccaaaacaataacagctgctaataatgaagagaattacaagcttacgagagctgctaaaCTTCTGTGATATTCCTCAACCGCAATCCTAACGTGTCGGAATATTGttgcgttttaaaattcctccggTTAGTGTGAACGGCCCTAAGCGTCGAGTGAAGcgaagccgctacagtttttcCCAGCCAACGAAAATATTGCAAAAGTGTGTGATAGAATAAAGAAGGCCTGAGTACGTAACTGGCAAGAGAAAAACAAATCtgttaaacattttaaaaagtttttgaaGTCTAATGTACGTGTGGTTGCGAAAGTATGTCTATAAACAAACCAAATCTtcacaaataaataaaattgttttaatttatattttatacGAAAAAATGGTATCACTCATAATTGTGAAATAAAATGATTTATAGAAA

Protein

Uniprot

Uniprot term	Description
Q8BHY8	Sorting nexin-14 OS=Mus musculus OX=10090 GN=Snx14 PE=1 SV=2
Q5R903	Sorting nexin-14 OS=Pongo abelii OX=9601 GN=SNX14 PE=2 SV=1
Q9Y5W7	Sorting nexin-14 OS=Homo sapiens OX=9606 GN=SNX14 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00787	PX	PX domain	Domain	Interproscan
PF08628	Nexin_C	Sorting nexin C terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001683	Domain	Phox homology	Interproscan
IPR036871	Homologous_superfamily	PX domain superfamily	Interproscan
IPR013937	Domain	Sorting nexin, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22775	SORTING NEXIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18470	ARHGAP1, CDC42GAP; Rho GTPase-activating protein 1	-	Membrane trafficking	ko04131	deepkoala