Gene detail

Detailed information of ENSOFVP00000033873.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020620549.1, uncharacterized protein LOC110058272 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000036744

ATGAACCCCCAAGAAAAAGCATCCGAGAAATGTCGATGGCTTCGTTTCAAAATTCCCTGCTGCTGCAAGTTTGCATTCAACATTCGGCTCAATCCAGTTGTATCTCTTCTTTCCGCCCTCGTCATCTGGGGATTTGTCGTGTGGTGTATCTTGAAAGCTAAAGCGGCAAACGAAGAGATGGGCAGGTGGAGAGGATGGATCACTTTAAAATTCACTTGGCTGTACATCGGCACGCAGGACGTGTGGGCCCTGTTCATTATTGTGCTGTATTTGTCCAAatattcaaagatgaagctgggCAAACCGCACGAAAAACCCGAATTTAACGATGCTACGTATTTCACTATGCTGTTTGCTGCGGGCATCGGGATTGGCCTGTTCTATTTTGGAATAGcgGAACCTATCTGGCATTACGAACCTGGACATTATGGGAATCGTTACTTTGGAAGGTATTCCGACAACCAACGAGCTCAAGATGCCATGAACGTCACCTTCTTTCACTGGGGAATTCACGGCTGGATTGTGTATGTGGTGGTTGGACTTCTTCTTGGCTTCCTCAGTTACAGAAAAGGTCTTCCTATGACCATGCGATCCTGCTTCTATCCACTGCTTGGTGACGGGATCTATGGATGGATGGGTGACTTCATCGACACCCTCTCTGTTGTGTGCACCATGTTTGGAGTGTGTACAAGCCTGGGTCTTGGTGCGATCCAACTTAATGCTGGTTTTCAGCGACTGAACAGGAACATCGCGTTCAGCACCACAAACCAGATTATTACCATCTGGGCCGTGACGGCCTGTGCAACCCTATCAGTAATCAGTGGCTTGAAAGTTGGAATCAGGCGCCTTAGTGAACTGTGCTTTGCAATTGGCATGGTACTGATGTTGATTGTCCTGTTCTTTGATGAAACCTGGTATCTGCTAAATTTGTACGTTCAAAGTATCGGCTACTACCTCCAGTATGTCGTCCAGGTCGGATTCCACACGGATGCTTTTGCACAACTCCACAACGCTCCGGATCAACTGGAGGCTTCCGAGTGGATGAACGACTGGACCATCTTCTACTGGGGTTGGTGGATTGCCTGGTGCCCTTTTGTGGGTATGTTTATCGCTAAGATTTCACGAGGTCGAACGATCAAAGAATTCATCAATGCCACCCTGACTGCACCGATATTTTACACCTTTCTTTGGCTTACTATATTTGGTGGAGCAGGATTACGAATGGAAAGAAGCGCAGCATTGGCAAACATAACGTGTTCGTCATCCCTGGGAGGTACAAATGCTACACAAAACTTTCATGGTTTGTACCGTCTGTCCTGTCGCTCGAAGAACGATATGTGGTTCGACGTGATGGATCAGTATGGAGATCTTGGACCATTCCTGTCAGTTACGTCCCTGATTGGTATAATCCTTTACTTTGTCACCAGTTCAGACAGTGGCTCATTGGTCATCGACTGCCTGTCTGCAAACGGAGATCCTGACCCTCCGGTACCACAGCGCGTGTTCTGGGCCTTGACAGAAGGTGCTACCGCGACAGCTTTACTTTACGCTGGAGGTACAGATGCACTGCAGGCTTTGCAGGCCGTATCCATTGCTGCTGGACTTCCGTACAccattttgctttgttttatgTGTGTGGCGCTGTGGAGAGCTGTTCAGATGGAAGCTGGTGATTTGGATCCCAATGGACCGCAGTTTAGCATCTCCTTGTTTAATCCAATCAGTCGACCGTCATGCAGttcttttttcaaacttttttttgcTACAGTAGCTCCCTGGTATGTGATTGGTATCGCCGTAGAACGAAGGAAGCCCAGCTCCCATAGAGGAATGGCCTGTTACATGATTCTTATGGGAGTTCCATTTTATGCCTGGATGGCCATGATGGTGGCGGAGTTACTGCCGGTGAATGGAATCTCGTATGTCGGGTGGGCCGCTCTATTCTTGTTTTTTGGTGTTGCAACAGCCATCCGAACTGGCATAAGAGAAGAAGATGGAATACACGGTAACATGGTGGAGGATTTCTTTGTGGTCATGCTGCTGTACCCTTTTGCTGCTTATCAGATGGACCAACACTCGCTGAATCACCAACCGAGGAAGAGAGGAGATACTGAACATGGCCACAGCCACGAGAATCCTGATCACAACGTTACTGGTCGTAATAGATCAGAAATGACTCAGTTGTAA

Transcript

ENSOFVT00000036744

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A0B5RUB0	Trimethylamine transporter OS=Myroides profundi OX=480520 GN=tmaT PE=1 SV=1
Q87PP5	Glycine betaine/proline/choline/ectoine transporter VP1456 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1456 PE=1 SV=1
Q87NG3	Glycine betaine transporter 1 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1905 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000591 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02028 all species →	BCCT	BCCT, betaine/carnitine/choline family transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000060 all species →	Family	BCCT transporter family	Interproscan
IPR018093 all species →	Conserved_site	BCCT transporter, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30047 all species →	HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0071705 all species →	Biological Process	nitrogen compound transport	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006810 all species →	Biological Process	transport	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000033873.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.