Gene detail

Detailed information of ENSOFVP00000034123.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020626708.1, neurogenic locus notch homolog protein 3-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000037027

TCGAGCATCACACCCCTGTGGTGGGtgctgttacatgtacattgtaaataTCcTCTGCTATCTTACTCATGCCAGGACAGGACACGTGCATGCCCAATCCCTGTCAACACGATGGCACGTGCTTACAAGCTCATAACAATCGTGGATACCACTGCCTTTGTCATGCCGGCTGGAACTGATCTTTGCTATCCCACAAGCCCTTGCCTCAATGGAGGAACATGTTTCAATGCATTGGACACGTTTATTTGTCACTGTCCGCTGCGATACTCAGGAAAACATTGTAGAAccGTTGGAGATCCGTGCCAACCTAACCCATGTGAAAATGGCGGGAGGTGTAATCTGGGACGTGGTGAAAAATTATTTGAGTGCGTCTGCCGCGAAGGATTTACTGGGGCTAAGTGTGAAGTGTCTAAGAGTGCTTGTATGTCAAATCCGTGTGTAAATGGAGGAACGTGTGTAGATGTGACAAACAATGATGGTTCTCTATTGGAGGGCGTGATATTTACAAACCCTTCTCAATACAAATGTGTTTGTCCCAAGGGTTACGCAGGAAACACATGCCAAAAACTGGTGATGGCAAATCCGTGTTCCACTCACCCATGTCTCAACAATGGCACGTGCTTTGACGATGCAAACAGCGCTGGCATGAATTTAAAACTGATCAACGCTCTTGATTTCCGTTGCTTCTGTCCGATTGGATACAGTGGGATTGTCTGCGAAATTCCCAGATCGGCATGTCATTCAGGCCCATGCCTTCACGGCGGAACATGTCTCGACTCTTCTAATACTGCAGATGTAGCGTTCAACGCTAATGGTTACAAATGCCTCTGTTTTGAAGGTTTCATTGGAATGAACTGTGAAGAAGTTTCCTTGCAGGGAACATCCAAACCTCTAACCGTACATTTCTACAAACCAACGGCTGTACCTCTTGTTATAACTCCACAAGTGCCAAAGGAATCCCTTCTGGTGGGAGCTGCAGCAGAACTACCGAAAACGACCCTTCCTACAGCGGTTCCATCGAAGCCCAATGTTGGTCTAACAGCGGAGGTTGAAAAGTCACATCAGAACCAAGTTGGTGTTATTGTAATTCCACAATCGCCGCAGCCACTTTCAAGGACAAGCACTGGAAGTCAACCTCCTCCCCAACCCCCCATTATCCACGCTTATAGTGGTCCTTCCAGTTCCCTAGTGGCTACTTTTCCTTATGCAGGCAGTAATTCCCCTTTAGCACCCACTACAAGACAACTTGGTTATGTCATACCGGCGTCTCCACCCTCATTACCATATGTGGCCTCTCCAAACTTAGAAGCAGCGCCCTCCAATGCTGCTATTTCTTATGCCGTTCCAGGAGCCAAGGCAATGCCCGCTCAAACACCATCAGCTGGTCTGATCTCTTCACCTCCAGTAATACCATCTCTGTTTACTGGGGTAGCGGCGTCTCCAGCCATCACCCAGGCACCGGCAATTGTCATGCCTCCAGGGCTGAGGCCACCACCAGGAAATGGACGTCTCACCCTGGGTCTGCTTGGAGGCCTTCCCCGTCTTGGAACACCAACACGGCAACATATTCAATATCGGAGACCAGCTAATTATCAACCCGGTTATGCTGGATATTATGGCAGAAGATACCAGAGGCATAATCCGGTAAGCTACGGAAACTCACGGTATCCTTACTTCCAGAAACAGTGTGGAGAATCTTTGCTTCCTGAACCAGTGTCTCAATGGAGGTACGTGCATGGAGTTGAAAGCAGATGTCGAAGTAACCCTTGCAGAAATGGGGGAACATGTTATGACAATCACAACTCTTATACCTGTTCCTGTCTAGCGGGCTTCTCAGGAATCAACTGTGAATCGATGGTCTCAGTATGTGACTCTAACCCATGTCTTAATGGTGGCTCATGTCTTAATCAAGGACCCAACGTCTACAAGTGTGTATGTCCGCACGGCTTTCGTGGAAAGAACTGTGAAACCGAGAAAAAATGCGAACCTAACCCTTGCCAGAACAGTGGAGTTTGTAGAGAACTTGTGGAAGATGAGGACTACAAATGTGAATGTTTACATGGATACAGAGGCAAAGATTGTGAAGAGGAGATTAACTTGTGCGAATCAAATCCGTGTACGAATGGGGGAACTTGTTCTACACTGTTAAATTCATACCACTGTCTTTGTGTCGAAGGATTCCGTGGAATTAATTGCCAAGAGGAGCTGAAGTGTCATTCCAATCCATGTCAGAATGGCGGCACCTGTTTTGAGAACAGCGGTGGCTACACTTGTACCTGTCCCCCAGGCTACAAAGGAATCAACTGTGCAGAGCGCGATAGCTGTCACCCTAACCCATGTCATCATGGTGGTGTGTGTGAGATAGACGGTGATGATTACACGTGTTCCTGCTCGTCTGGGTGGACTGGACTCACCTGTGAAGCACCTACCACATTAGCATACGCGGTGGCAAACACATGCGCAGCTACGACATACGGCTGTTGTCCTGATGGCAAGACACCCGCTGCCGGACCTCACCAGGCAGGCTGCCCTGGTAAGGAACTCGCTAATACCCAGTGGTATAATTTTATTCGGGAAGGTTCTTGA

Transcript

ENSOFVT00000037027

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O35474	EGF-like repeat and discoidin I-like domain-containing protein 3 OS=Mus musculus OX=10090 GN=Edil3 PE=1 SV=2
O43854	EGF-like repeat and discoidin I-like domain-containing protein 3 OS=Homo sapiens OX=9606 GN=EDIL3 PE=1 SV=1
Q5R7K9	EGF-like repeat and discoidin I-like domain-containing protein 3 OS=Pongo abelii OX=9601 GN=EDIL3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006860 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12661 all species →	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF07974 all species →	EGF_2	EGF-like domain	Domain	Interproscan
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR051022 all species →	Family	Notch Signaling and Cell Fate Determination	Interproscan
IPR013032 all species →	Conserved_site	EGF-like, conserved site	Interproscan
IPR013111 all species →	Domain	EGF-like domain, extracellular	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24049 all species →	CRUMBS FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000034123.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.