Detailed information of ENSOFVP00000034514.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020611368.1, THO complex subunit 6 homolog [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5XJS5THO complex subunit 6 homolog OS=Danio rerio OX=7955 GN=thoc6 PE=2 SV=1
Q5U4D9THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1
Q6AY87THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005827 (this species only)

 Pfam domain
No Pfam domain signature was detected for ENSOFVP00000034514.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR042626
all species →		FamilyTHO complex subunit 6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44411
all species →		THO COMPLEX SUBUNIT 6 HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000346
all species →		Cellular Componenttranscription export complexInterproscan
GO:0000347
all species →		Cellular ComponentTHO complexInterproscan
GO:0006406
all species →		Biological ProcessmRNA export from nucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000034514.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP