Gene detail

Detailed information of ENSOFVP00000034523.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020617280.1, ankyrin repeat and sterile alpha motif domain-containing protein 1B-like isoform X2 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000037466

ATGGGGAAAGAGCAGGACCTTCTACAAGCAGCAAAGACTGGAAATGTTGCACACATCGAGAAGATTCTCGGGCACAAGGCGAGGAAGTCAGGAATCCAAAGTTTAATGAGCAAGACTGTAAATCCTAATCATCAAGACGAGCTTGGTTATACTCCGCTTCATTATGCAGCGTTAAATGGACACAGGTCATCAGCAGAGCTTCTTTTGAAATATGATGCCTCTACAAACATTCCAGACAATTCTGGGAACTATCCCCTTCACTTGGCTGCGTGGAATGGTCATGCTGATGTGGCTAGAGTGCTGATAAACACAGGACCATCTAGGGCAAATGTTAATGAACAGAATGGCACTGAAGATACAGCATTGCATTCAGCTTCCCAGTTTGGCCAGAGCCTTGTTGTGGCTGTATTGCTTGAGAATCATGCTGACCCTTACATTCGTAATGGTCGCCAAGAATCACCTCTTGACTTGGCAGCTCAGTATGGCAGAATGGAAACTGTTAAGCAACTGCTGAACTATCATCCCAATCTGCTTGAGGATGTGAATGTGGTCAGGACGCACACCCCTCTTCATCTTGCCGCCAGAAATGGTCACATGAATGTGGTATCTTACTTTCTTAGCTGCGGAATGGATGTTAACATAACATGTACCTCTGGAACAGCTCTTCATGAAGCAGCCTTGTTTGGTAAACTGGATGTCGTCAATCTTCTTGTACAGTGTGGGATTGATGTCACAGTGGTGGATAGTAACAACAAGACAGTAATAGATCTGTTGGCTGATCACCCCTCAGCAAAGACAAGAGAGATAGAAAGTCTTATTTATGGTGAGTTTTGTGAATTCCGACCAAATGCGAGGTCTTCTAGGACATCAAACACTTTCCCTGGATTTTCAGATCGACCCAAGTCAGCAATGTACACAAGGAATCTCAGTTATGATAATGTACCAAATCGACAAGTTTTTGACTCTGACCAGCTTCGGAGATCTGGCACGTATGATTCGGTTCCAGCTCTGAGAACAAAACAGGAATCTTTGATGCAAACCAGTTATGATTATGTTCCACCTCCTAAAGCTACTTCAGGCAGACACTCCCTTGACTGGACTAGATATGACGAAGTTGGATCCAGATCTCCAAACGATGTCCACTTGTCTAATGCTGGTAAAGGGTATGCCCTCCTAGGGCCTCCTGAGGAGCCTTCCCCTATGCTAAGCGCACAGGAGGTCAGAGCAGGCTATACCTTCCTTGGCTCTCCAGCACAACCAGGGGCAGTTACCAATGCACGGTGCCCACTGCGCCCTGACAGCACTTATGCTGAAGTCCGAAACGAAGGAGAGAGCTTTGCACAAACTAAAATTGGTGCGCATTCTCAAACAGTGTTCGATGATTATTCCTGTGTTGGATTTCCATCCTCTGGGGAGGAAAGTGAACCTAAACCCATATCAGGAATGGTTAGTGAAGATAACCCTGACTATTTTTTGGTTGGCGAGCCAAATCAACAGCTTTCACGAGCTCAGAGGCAGAACAATGACAGCTATGACTTGGTTGGATCACCACAGGGGTCAAGACTGAGTTCAAGTAGACAGCCGAGTATCTATGAAGTCCCGTCATCATTAAGAGGTAAAGGGAACGGTCAGGAAGGGGATGCCACACCCAGCCGAGTCTCTTCTAGAACATCAAGGGGCCAGTCATTTGATTTATATGAAAATACCACCATTGGAACTCCACAGCAGTCAAATCAGCCGCCCCGCCAAGATGTTTCTTACGACCTTGTGACACTTCCGCCACGAAAGGCTACGCTGGATCAACCTTCATATGATGTGGTATCACCGCCGAGTGAAGTACCTCAGGAGAAAAAAAGCGCCGTAGGGCTGCATAAATCGTCAGCTTCAGTTGCAAGGCCCCAAGGAGAGAAGCCCTGTCCACTGGATGCTGAAGGATATGAGTTTGTGCAGCTACGAAAGCCAGGTACCTTACCTAGTGATTCTACACCTGAAATGCAGCCTTTTGCCCCTTTGGCTGGCTACGAGCCTATGGGTCCTCCAGAAGATACTGCGTACGAAGTACTGGCCCCTCCGGCGGAACTACAGGAGCAAGTCGCCGACCGTGGAGATTACGAAACTCTCGCTATGGTGGGTGCACAAAGAACAGGGTCTCAAGCAGTATCACCGCAGATGACCCAGCAACCATCTGGTTCGATGAACATTCCTACATCAGCACCTCTGTATTCCATGGTTGGTCCTCAAACAGCAGGGCCCCAGACAGGATCAGCGCAGGCGAGCCAGCAATCATCGGCACCTTTGTATTCTATGGTTGGTCCACAGACAACAGGGTCCCAGACAGGATCAGCTCAGGTGATACAGCAACCATCTGGCTCTATAAGCATTCCAGTGTCAGTATCTCTGTATTCTATGGTTGGTCCACAAGGAACAGGGTCCCAGACAGGATCAGCGCAAATGGCCCAGCAACCATCTGGCTCAATGAACATTCCAGTGTCAGCACCTCTGTATGAAGTGCCTCCTATTAAGTCATCGCCTGTGTACGAGATCGCTCCACCTCCAAGGGACGTGCCACCGATACCTCCCCGGCAATCCGCAGCTGCCCCGCCTCAGTCCCAAAGCAGTGGTGAAATGCAGTGGATTGAAAAGGAGCATGAACCAGCTCTACCCAAGGTCCCTCCACGGAGACAAAACGAATATTCAGAATGGCACCTTGGCATGAGACAAGAACCGCCGTCACCGGGAAGGCCTCCTAAGAAAGGGGCCTACGAGCTAGTGCGCCTTGAAGGTCCCTCTGAAAAGGGAACCATAGACTGGGACAGAGTCCGGAAACTGAGCGCGCGAGGTTCAGGGGGGGAATATTGTACACTGTCGACTACGGCAGTAGGACCTAGTGAAACAAAGAACAGAGAGAGTACCACCTCTAGCGAGATATCCTTTATGTCGGAGTCGGTCTTAACACCACCTTTCTCGCCACCGTCACCCAACACTGCTCAAGCATCAGTGTTTGAAGCGTTTGGGGCTCTTCAGCCCTCAGACATGTCAACGATCCCAGAGGATCCTGAAAATGTCATGGATCAACCACCCCAACAACCGCAACCCCCCCGTCCCATGCCGCGTAAAAAGTCCAAACCGAAGGTTCTTCCACGCAGTGACAGCTTACATGACGAGGAGTATACGACAAAACGCGGCGATGCTAGGAACTTTGAAAATGGCTCGGGTTCTTTTGAAAGAAATCAAGATCCGTTCAGTTTTCCCCCCGCCGCCACTCTCTCTCCGAGGACCGAAAGCCCAAAGAAGGGTGATTTCACCCATCTGCACAAGAGATTTTCGCCGTACTCTTCACGAGAGGACCTTTTCACTGAAACCGACTCTGTGCCGGACAGCGAGCGTCAAGCACCAGACGGAGCCGAGGCTGAAAGCGACGTCAAACCATCGCCATTGATTTACGAGAACGTTTTGTTCAAACAAGGCGACGACGCGGCGGAAACCAACGGAAATCAACCCCACGAGAACGGCAGCGTCATCAAACGAGCTGCATCTGCAGAAAGGCCTGGGTCCTACAGGTTGAGCACATTGTCAGCGGATAGCCCCATGGACGAGAGAGAAGAATGGGAAAAGATCGAAGCTTTTCTATCTTCTATTGGTCAAATTGAAGTGCCTCAGACTTTGGAGCAACAAATCGCTAATGCGGGCAAGGCAGACACTGTTCCTGGCTGGCTCAAGGCGTTGGATCTTGATCAGTACGAGTCGTCCATGATGGCAAATGGATTTGATGATATCAACTTCTTGAATGGAGTTCTCGAAGATGACGATCTTTTGGACATTGGAATTGTAGACTTTTCTCACAGAAGGACAATTATGGAAGCCTTGAAGTCCTTACCAGCTTGTCCGCGGCTTAGCGACCCCGCCTTATCCAAACCCGAGGGTTTAGAGGACTGGTTAGAGCTACTTTGCCTTCCCGAGTATTTTGACGTGTTTCAGCACAATGGCTTCACATCCATGGAGAGGATTCACATGCTCTGGGAAGTGGAGCTGACGTCGgttttggAAGTAAACTCCCTTGGCCATCGGAAACGAATACTCGCCTCGTTAAAAGAAGACGTAAAAGAAGCACAAAGGAAGGACCAACCAGATATCCCAAACCTTGACGAAAGCAGTATGGATCTCGAAGAGAAGCTGGCCGAGCTCAAGATGTACTGCCCAGACGAGAAACCGCCAGCCACTGCGACTGCATCATCAGTGAGTAACGCCGTAGGCTCAATGGCGGCTCGTGAAGAGTTCATGACTGGCAACAAACAGGTGCCTCAGAAAAAGCCGAGAAAATCGAAAAAGTGGAAACACGAATCGTCAGTGTTGATTAAAGGATGCGTCAACTACACCACCCTGTACCTCGGGTCGCATGCTGTCAAGACAATCACAGGATTGGAATCGACTATTGACGCTTGCCGTAAAATGAGGCTGTCAACTGCCAAGCAACAGAAGATTCCCTCTGTGACACTGTCTGTGTCGGTTAAAGGAATTAAGTTCATCGATGCAAGGTCAAAGATTATGGTGAGCTATCACGACATGAGGAATATATCATACATCACTCAAGATCCAGAGGACAGAAGAGTGTTCGCTTACATCGCCAAGGACGCGAAAACGGAGAAACATTACTGCCACGTGTTCAGGGTGGAATCCACTCTGGCCTTCAGTCAGTTCAAGCAGACTCAGAAATCACCTTCCTGA

Transcript

ENSOFVT00000037466

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P59672	Ankyrin repeat and SAM domain-containing protein 1A OS=Mus musculus OX=10090 GN=Anks1a PE=1 SV=3
Q92625	Ankyrin repeat and SAM domain-containing protein 1A OS=Homo sapiens OX=9606 GN=ANKS1A PE=1 SV=4
A5PMU4	Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS=Danio rerio OX=7955 GN=anks1b PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003331 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00536 all species →	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan
PF07647 all species →	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00640 all species →	PID	Phosphotyrosine interaction domain (PTB/PID)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006020 all species →	Domain	PTB/PI domain	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR033635 all species →	Family	Ankyrin repeat and SAM domain-containing protein 1/Caskin	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24174 all species →	ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21413	ANKS1; ankyrin repeat and SAM domain-containing protein 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.