Gene detail

Detailed information of ENSOFVP00000034987.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: RMX44516.1, hypothetical protein pdam_00006048 [Pocillopora damicornis]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000037952

atggcAGAACTGTCCAACGAAGAGTTCAGAAAGAGTCTTTTTACAACTTTTCGAAGTCGTGGCGTGTTAGAGGCTCTGAAGTCTCAGCTTAGAAATCGTCTTATAACAGAACTCCAGGAGACTTCTGGCAGAGATGGATTGACAGCTTCGTCTGACCCCTCAGTGGTTTCAGAGAATTTATGCGAACTTGCAGCAAACAGCCTTGTTGCCGACCATTTGAAGAGGTTTAAATATGATTATTCATTATCAGTTTTTCTACCAGAGAGTGGTTTGCATCAAAACAAGTTGCTCACCATGAAAGATGTTCTTCTATTACTCAAGATTCCTTCAGATTCTCCACTCTTCAAACATATGGAAACACTTCTGGACAGGAACAGGTCATCAAATGGTTTGCTGATAGAGTTGTTAAGTCATTTGGCTTTGTCTCATAACTGTGATAAGTCTTCCAAGGGAGTTCAAGCATCTTTACAACAGCTTTCTTCAGTAGAGGATAAACTTCAAAGTGTTGAAAAGCAATACCTTAAGGATCTACAGAAAGAAAATCAGAAGTGGAGTTCACagacagaaaaacatttatTGGAATTACACAAACAGTGGGAAcataaaaagaagaaattgctTAATGAGGAGCTTGAATACTTAAAGACGACAGAAATAGCTCGAGTGAAGCttgaagagaaagaaaaatatcaaaGAGAAGTCCAAAACATGAGGAAACAGTTTGAGCGAGAGTTTGAGGTCAAGGCTGAGAAATTGAAGGCTgatgagaaagaaaaattacagCTATTAGGAACTCAAAAAGAGCTTCAAGAAGAGGAAGCCTATGTGCAGCGACAGAAACTCCTGGAAGATATGTTATCCCTCAAAGAACGTGaatcaacatttgatttgaaccaccaaatgaaaacaaaGAGCCTAAAGCTTGAGGAAGAAAGGATCAGTGTTTTGTCACAGGaactaaatataaaaaaatctcTTTTAGAAGATGCAGAGGCTAATTATCATAGGAGACTCAATGAGGAAGTACAAAGACATAAACTGAAATGTGAAGAAGAACTTCATGAAAAGAGACGACATATAGAACTCAAAGAGAAACAACTACAGGGGGATGTGGATAGCTTTGAAAGAAAGCAAGGTGTCTATATGAATGCCTCTAACGAACTGCAAAGAACCAAAGACAAGTTACAACAGTTACAGACTCAGCTTGAAAGCAACAAGTCCCATCTCACAACAGCTCTTCAGCAGAAGGAAACTGCAAACAAAAAACTAAAAGAGGATTTAGAGGTTATGAAGGAAAGGGAGGTGACACTTTCCAAGGAGAATGCGACATTGAAAAGAAACTTGTCAAAGTATGAAGAAGAACAGAAAGgGAATAAAAGACTAGTAAATGAACTAACGGAGAAATCAGTGGAGTCTGCAGCAGACCTGTTACATTTACGAGATCAGCTGAAACATATGGAGAAAAGTACCAAGTCCAAAGAGAAGTCTTGGAAGGAATACAAAGCTAAGATGGAATCCAGATTGAATGATGAGAGTCAGAAGCGATTAAACTATCAAAAGCTATATGAAGAAACCCTGACGAATCAGTCTGCGTTAAATCAAGAGATAGCTGACTTAAAACTTACTTTACAACAAACACAACAAGTACTTGACATGGAACTTGGCAGAAGAAGAGCGAACTCATTTCCTCGCCTGGATTCTTTAACAAACGAAGAAGATTCCCCTGCATCACAGACAACCCAGCAAGGAGGTGAAAGAACATTACTAACAAACACTGCGATGGACGAAACCAGTAGCACGATTGTTATGATAGCTCAGAGCAAGATGCTATTTGATCGGCTGGAAGTAGAGGCCAAGGAATTAGAGGAGTCCTATCAGAAGTTCCAGTCACGAATAAATCAAATGGAGCTCGATGTCTATCCAACGATTCGCTCCCTGGATTTACAAAATCCCACTCAAAGCCCAATCGAAAGTActtcatttgaataa

Transcript

ENSOFVT00000037952

TCTGCCGCCATGTTTGAAagtaagcaaaaacaaaaatatggcAGAACTGTCCAACGAAGAGTTCAGAAAGAGTCTTTTTACAACTTTTCGAAGTCGTGGCGTGTTAGAGGCTCTGAAGTCTCAGCTTAGAAATCGTCTTATAACAGAACTCCAGGAGACTTCTGGCAGAGATGGATTGACAGCTTCGTCTGACCCCTCAGTGGTTTCAGAGAATTTATGCGAACTTGCAGCAAACAGCCTTGTTGCCGACCATTTGAAGAGGTTTAAATATGATTATTCATTATCAGTTTTTCTACCAGAGAGTGGTTTGCATCAAAACAAGTTGCTCACCATGAAAGATGTTCTTCTATTACTCAAGATTCCTTCAGATTCTCCACTCTTCAAACATATGGAAACACTTCTGGACAGGAACAGGTCATCAAATGGTTTGCTGATAGAGTTGTTAAGTCATTTGGCTTTGTCTCATAACTGTGATAAGTCTTCCAAGGGAGTTCAAGCATCTTTACAACAGCTTTCTTCAGTAGAGGATAAACTTCAAAGTGTTGAAAAGCAATACCTTAAGGATCTACAGAAAGAAAATCAGAAGTGGAGTTCACagacagaaaaacatttatTGGAATTACACAAACAGTGGGAAcataaaaagaagaaattgctTAATGAGGAGCTTGAATACTTAAAGACGACAGAAATAGCTCGAGTGAAGCttgaagagaaagaaaaatatcaaaGAGAAGTCCAAAACATGAGGAAACAGTTTGAGCGAGAGTTTGAGGTCAAGGCTGAGAAATTGAAGGCTgatgagaaagaaaaattacagCTATTAGGAACTCAAAAAGAGCTTCAAGAAGAGGAAGCCTATGTGCAGCGACAGAAACTCCTGGAAGATATGTTATCCCTCAAAGAACGTGaatcaacatttgatttgaaccaccaaatgaaaacaaaGAGCCTAAAGCTTGAGGAAGAAAGGATCAGTGTTTTGTCACAGGaactaaatataaaaaaatctcTTTTAGAAGATGCAGAGGCTAATTATCATAGGAGACTCAATGAGGAAGTACAAAGACATAAACTGAAATGTGAAGAAGAACTTCATGAAAAGAGACGACATATAGAACTCAAAGAGAAACAACTACAGGGGGATGTGGATAGCTTTGAAAGAAAGCAAGGTGTCTATATGAATGCCTCTAACGAACTGCAAAGAACCAAAGACAAGTTACAACAGTTACAGACTCAGCTTGAAAGCAACAAGTCCCATCTCACAACAGCTCTTCAGCAGAAGGAAACTGCAAACAAAAAACTAAAAGAGGATTTAGAGGTTATGAAGGAAAGGGAGGTGACACTTTCCAAGGAGAATGCGACATTGAAAAGAAACTTGTCAAAGTATGAAGAAGAACAGAAAGgGAATAAAAGACTAGTAAATGAACTAACGGAGAAATCAGTGGAGTCTGCAGCAGACCTGTTACATTTACGAGATCAGCTGAAACATATGGAGAAAAGTACCAAGTCCAAAGAGAAGTCTTGGAAGGAATACAAAGCTAAGATGGAATCCAGATTGAATGATGAGAGTCAGAAGCGATTAAACTATCAAAAGCTATATGAAGAAACCCTGACGAATCAGTCTGCGTTAAATCAAGAGATAGCTGACTTAAAACTTACTTTACAACAAACACAACAAGTACTTGACATGGAACTTGGCAGAAGAAGAGCGAACTCATTTCCTCGCCTGGATTCTTTAACAAACGAAGAAGATTCCCCTGCATCACAGACAACCCAGCAAGGAGGTGAAAGAACATTACTAACAAACACTGCGATGGACGAAACCAGTAGCACGATTGTTATGATAGCTCAGAGCAAGATGCTATTTGATCGGCTGGAAGTAGAGGCCAAGGAATTAGAGGAGTCCTATCAGAAGTTCCAGTCACGAATAAATCAAATGGAGCTCGATGTCTATCCAACGATTCGCTCCCTGGATTTACAAAATCCCACTCAAAGCCCAATCGAAAGTActtcatttgaataaaaaacatttgCAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q80Z25	Centriole and centriolar satellite protein OFD1 OS=Mus musculus OX=10090 GN=Ofd1 PE=1 SV=1
O75665	Centriole and centriolar satellite protein OFD1 OS=Homo sapiens OX=9606 GN=OFD1 PE=1 SV=1
Q7SZK7	Centriole and centriolar satellite protein ofd1 OS=Danio rerio OX=7955 GN=ofd1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003511 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16045 all species →	LisH_2	LisH	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006594 all species →	Conserved_site	LIS1 homology motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR39063 all species →	ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0060287 all species →	Biological Process	epithelial cilium movement involved in determination of left/right asymmetry	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000034987.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.