Detailed information of ENSOFVP00000035174.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020607330.1, DNA-directed RNA polymerase I subunit RPA43-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6PHG8DNA-directed RNA polymerase I subunit RPA43 OS=Danio rerio OX=7955 GN=polr1f PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009693 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17875
all species →
RPA43_OBRPA43 OB domain in RNA Pol IDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045113
all species →
FamilyRNA polymerase subunit Rpb7-likeInterproscan
IPR041178
all species →
DomainRPA43, OB domainInterproscan
IPR036898
all species →
Homologous_superfamilyRNA polymerase Rpb7-like, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12709
all species →
DNA-DIRECTED RNA POLYMERASE II, IIIInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005736
all species →
Cellular ComponentRNA polymerase I complexInterproscan
GO:0006352
all species →
Biological ProcessDNA-templated transcription initiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000035174.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP