Gene detail

Detailed information of ENSOFVP00000035357.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: CAH3019681.1, unnamed protein product [Porites evermanni]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

ENSOFVT00000038348

ATGGCTACTCTAGATGATGCCCTTTGCAATGTTCATCAACTTGCAACCATCAACATTCCCGATGAACAACCTCAAATTGAAGCACCTCCTGCCTCGGTTACTTACATTTCAAACTTTGACACAAACTTTGAGGACAGTAAGGCTTTCATTACATGTATCAGCAAGTATTTGGAAGAGGCGGATGTACACAAGGGCTTGAATGAGATGCTTGAAGAAGGTGGAAGATATGCAGTGATGTTGTACACATGGAGAAGCTGCTCACGTGCTGTTCCTTCGGTTAAAAGTGATGACCAGCCGAACAGAATTGAAATCTACGAGAAGACAGTGGAAGTACTAGAACCAGAAGTGCGCAAACTGAAGAGCTTTatgcattttgcaaaaagcGCTGTTGCTAGATTCTGCAAGGAAGTGAAAACTCTGAGTCACCCAGAAAGAAGGAAAGATTTTATATCAGAAAGATATCTTTTGACTCTTGGAAAATTCATCAACATGTTTGCAGTGTTGGATGCCTTGAAGAATATGAAGGCATGCCTTAACAATGATTATGCTTTCTATAAGAGAGCTGATACCTTTCTGCGCCGAGGCACTGGTGATGTGTCGATGATTGAAGAGTCCCAGAatctttcattgtttttggcGAATCAGAACAAGATCACATTCTTGTTAAAGGAAGGGCTTGAGACCATTCAAGGATATGATGATGTCTTGGCTGATGTGCTGGCTCTGTGTGTCAGACTATACGAGAGCAACATGTACATTACGCCAAATGATAAGCATGTACTTCTGAAGGTTATGGGCTTCCTGCTTTTTCTGATGGATGGGAAAGAGAGCAACATTATAAAGATGGATCAAAAGAAAAGGATCAGTATCAGCAAAATAGACAAGATATTCAAGCAATTTCCAGTAGTACCTCTGTTTGGAGATGTCCAGATTGCTCTTGTTAGTTACCTTAAGATGTGTCCTCACTTTGATGGCATGAAAGAGAAATGGGCAGTAGCTGCAGAGGGAGCAGAAGACAAGGTAGTAGTTCAATACAATCTCCTTGGAAAGATGGACAGTATTAGAGAAGAGCATGTCAAGTTTATCAGTGAACTGGCTCGTTACAACAATGAGATGATCACTTCCAGCAGCAGCCAAAGAAGTGATGAGCAATATAAAGAGCTGAGAAGTCTTGCACTCCGAGGAATGCGGCTTCTGTCATCATGGACTGCTCAAGTTATGGAACTGTACTCTTGGAAGCTTCTTCATCCTACAGACAAGTATGCTAATCCCAATTGCCCTGAGGAAGCTGAAGAATATGAACGAGCTACAAGATATAACTACAACAGTGATGAAAAGTTTGCACTTGTTGAGGTGATTGCCATGATCAAAGGTCTTTACGGCTTGATGATTCGCCTTGAACCACAGTTTTCGGAGTCTATCAGGCATTCCATACACAGTGAAGTACAGGATTTTGTTCAGGTCAGCCTGAGGGAGCCTTTGAGGAAAGCTGTTAAGAGCAAGAAGGCTACCCTTCTCAAGACAATTCTGTTGTCCATTCGTGAGACTGGAGGGGACTGGGCTGATGGGCAGCATGGAAGAGGGGACCCGATTCTGAAAGGAGAAAAGGACCCAAAGGCTGGGCCTAACATCAAGATACCAGATAGGGACATTGGACCCTCTAGTACCCAGTTGTACATGGTGCGCACCATGCTGGAATCACTGGTGTCTGACAAGGGAGGCAAAAAGGTCATGCGCAAGGAACTGGAGAAAGAGACGGTGGAGATGATTGAGACATTTTTGAAGAACTCTTTCTTCTTTGAACAGCTGCTTCATTTTAATGAAGTTTTAAGGGAGTGCTGTGACCTTTCTCAGCTTTGGTTCAGAGAGTTCTATCTGGAGTTGACAATGGGTGCCAGAATTCAGTTTCCTATTGAGATGTCGCTGCCGTGGATCTTGACGAATCACATTCTTGAAAGCAAGAATCCCAGCATGATGGAGTATGTCTTGTATCCGTTGGATCTTTATAATGACAGTGCTCATTATGCCCTGACTGTTTTCAAGAAACAGTTTCTGTATGATGAAATTGAAGCTGAGGTAAACCTGTGTTTTGACCAGTTCGTGTACAAGCTCAGTGATCAGATTTTTTCTTACTACAAGGCACAGGCTTGCAGTATGTTGCTGGACAAGAAGTTCAAATCTGAGCAGGTCCGTTTGGGTGTCGAGACTGCTGCGAAGCTAGGCACTCGTTCCAATAGATACGAAACTCTTCTGAAACAAAGGCACGTGCAGcttttaGGCCGTTCTATCGACTTGAACAAACTGATCACACAGCGTCTTAATAACTCCATGATACGATCCTTGGACTGTGCTATTGGTCGGTTCGAGAGTGGAGATATCTGTGGTGTTGTGGACTTGGAGAACTTACTCGACGTAAACCGAATGACGCACCAGTTGCTGTCTAAGTGCGTGAAGCTGATTCCATTCAAGAACATCCTGGGCGAGGCCAATCACTCCGTGTCTGCTCCTTACGGCAGGATCACTCTTCATGTGTTCTGGGAACTCAATTTCGACTTCCTTCCAAACTACTGCTACAACTCATCCACAAACAGATTTGTTCGCACATCATATGCTTTAGTGGAAAAAGTTTCCAGAGAACAAGCCCCAAAACAAGCGTATCATTATTTCTTCGGTACAAAACTTCAAAATTCCGTGTTTAACGCCATCGGGTCACTGTACAGTAACTTTGTCGGTGAGATTCATTTTGCTTGCATGGCTCGCTTGCTGGGTTACCAGGGAATTGCTGTGGTGATCGAGGAACTCCTGAAGATTATTAGGAGTGTGCTTCAAGGCCAGCTTCAATCATACATCGCCCAGCTCATTGAAGGAATGCCTAAGAAATGCGGCCTTCCTCGCTTTGAGTACGGATCCACAGGTGTCCTTGAATACTACCACGCTAGCCTTGAACCGATCATGCAGTACCCATACCTGAGGACAGACGTGTTTCAGGGATTCAGAGAGATCGGTAACGCCATTCTCTTCTGTCTCCAACTCGAGGGCTTCTTGTCCCAAGAGGAGATTATGGATCTGTTGCACGCTGCACCATTCCAAGGAATTATTCCCAGGCCATATCTTAAAGacGGCGAAAAGCTGGagaacaaaatgaagaaactCGAGACGCAGTACAATTCTCTGCAAGTTTTGTCAACCATTACCAAGCTTGGAACAAAAGAGCAAATAGTGAACGCCCAAGAGGGCGATCTGTTGACGAAAGAGAGGTTATGCTGCGGACTGTCCATCTTTGAGGTGGTACTCAAAAAGATTAAGACGTTCCTGAATCATGAGATGTGGATAGAACAGCCGCCTGCTAACGGTGTCATGAACATTGACGAGTGCAGAGAGTTCCACCGTCTCTGGAGCGCGATTCAGTTCAACTACTGTCAACCACTGCGACAAAACGAGCTCACAGTCGAGGAGTGCTTTGGTGAAGGTCTCAATTGGGCCGGATGTACACTCATTGCTTTGCTAGGGCAAGAAAATCGTTTCGAAGCGCTAGATTTCTGTTATCATATCGTCAAAGTGTACGCCGTGGATTCTCGAGACGAAGTTGTCGGTGGCGTGGACCTCAAGCGTCTTGTAAGCAGAGCTCGTCACTTCAGAGTATTGAATGACCAGATCTTCGCCGTGTTAAACAAACACCTCAAGTCCTCGGACGGGCCTGTGGAACATGTACGCTGCTTTCAGCCGCCCATCCACCAAGCATTTGTTTCTCCAATCTGA

Transcript

ENSOFVT00000038348

GAAAGATGGCTACTCTAGATGATGCCCTTTGCAATGTTCATCAACTTGCAACCATCAACATTCCCGATGAACAACCTCAAATTGAAGCACCTCCTGCCTCGGTTACTTACATTTCAAACTTTGACACAAACTTTGAGGACAGTAAGGCTTTCATTACATGTATCAGCAAGTATTTGGAAGAGGCGGATGTACACAAGGGCTTGAATGAGATGCTTGAAGAAGGTGGAAGATATGCAGTGATGTTGTACACATGGAGAAGCTGCTCACGTGCTGTTCCTTCGGTTAAAAGTGATGACCAGCCGAACAGAATTGAAATCTACGAGAAGACAGTGGAAGTACTAGAACCAGAAGTGCGCAAACTGAAGAGCTTTatgcattttgcaaaaagcGCTGTTGCTAGATTCTGCAAGGAAGTGAAAACTCTGAGTCACCCAGAAAGAAGGAAAGATTTTATATCAGAAAGATATCTTTTGACTCTTGGAAAATTCATCAACATGTTTGCAGTGTTGGATGCCTTGAAGAATATGAAGGCATGCCTTAACAATGATTATGCTTTCTATAAGAGAGCTGATACCTTTCTGCGCCGAGGCACTGGTGATGTGTCGATGATTGAAGAGTCCCAGAatctttcattgtttttggcGAATCAGAACAAGATCACATTCTTGTTAAAGGAAGGGCTTGAGACCATTCAAGGATATGATGATGTCTTGGCTGATGTGCTGGCTCTGTGTGTCAGACTATACGAGAGCAACATGTACATTACGCCAAATGATAAGCATGTACTTCTGAAGGTTATGGGCTTCCTGCTTTTTCTGATGGATGGGAAAGAGAGCAACATTATAAAGATGGATCAAAAGAAAAGGATCAGTATCAGCAAAATAGACAAGATATTCAAGCAATTTCCAGTAGTACCTCTGTTTGGAGATGTCCAGATTGCTCTTGTTAGTTACCTTAAGATGTGTCCTCACTTTGATGGCATGAAAGAGAAATGGGCAGTAGCTGCAGAGGGAGCAGAAGACAAGGTAGTAGTTCAATACAATCTCCTTGGAAAGATGGACAGTATTAGAGAAGAGCATGTCAAGTTTATCAGTGAACTGGCTCGTTACAACAATGAGATGATCACTTCCAGCAGCAGCCAAAGAAGTGATGAGCAATATAAAGAGCTGAGAAGTCTTGCACTCCGAGGAATGCGGCTTCTGTCATCATGGACTGCTCAAGTTATGGAACTGTACTCTTGGAAGCTTCTTCATCCTACAGACAAGTATGCTAATCCCAATTGCCCTGAGGAAGCTGAAGAATATGAACGAGCTACAAGATATAACTACAACAGTGATGAAAAGTTTGCACTTGTTGAGGTGATTGCCATGATCAAAGGTCTTTACGGCTTGATGATTCGCCTTGAACCACAGTTTTCGGAGTCTATCAGGCATTCCATACACAGTGAAGTACAGGATTTTGTTCAGGTCAGCCTGAGGGAGCCTTTGAGGAAAGCTGTTAAGAGCAAGAAGGCTACCCTTCTCAAGACAATTCTGTTGTCCATTCGTGAGACTGGAGGGGACTGGGCTGATGGGCAGCATGGAAGAGGGGACCCGATTCTGAAAGGAGAAAAGGACCCAAAGGCTGGGCCTAACATCAAGATACCAGATAGGGACATTGGACCCTCTAGTACCCAGTTGTACATGGTGCGCACCATGCTGGAATCACTGGTGTCTGACAAGGGAGGCAAAAAGGTCATGCGCAAGGAACTGGAGAAAGAGACGGTGGAGATGATTGAGACATTTTTGAAGAACTCTTTCTTCTTTGAACAGCTGCTTCATTTTAATGAAGTTTTAAGGGAGTGCTGTGACCTTTCTCAGCTTTGGTTCAGAGAGTTCTATCTGGAGTTGACAATGGGTGCCAGAATTCAGTTTCCTATTGAGATGTCGCTGCCGTGGATCTTGACGAATCACATTCTTGAAAGCAAGAATCCCAGCATGATGGAGTATGTCTTGTATCCGTTGGATCTTTATAATGACAGTGCTCATTATGCCCTGACTGTTTTCAAGAAACAGTTTCTGTATGATGAAATTGAAGCTGAGGTAAACCTGTGTTTTGACCAGTTCGTGTACAAGCTCAGTGATCAGATTTTTTCTTACTACAAGGCACAGGCTTGCAGTATGTTGCTGGACAAGAAGTTCAAATCTGAGCAGGTCCGTTTGGGTGTCGAGACTGCTGCGAAGCTAGGCACTCGTTCCAATAGATACGAAACTCTTCTGAAACAAAGGCACGTGCAGcttttaGGCCGTTCTATCGACTTGAACAAACTGATCACACAGCGTCTTAATAACTCCATGATACGATCCTTGGACTGTGCTATTGGTCGGTTCGAGAGTGGAGATATCTGTGGTGTTGTGGACTTGGAGAACTTACTCGACGTAAACCGAATGACGCACCAGTTGCTGTCTAAGTGCGTGAAGCTGATTCCATTCAAGAACATCCTGGGCGAGGCCAATCACTCCGTGTCTGCTCCTTACGGCAGGATCACTCTTCATGTGTTCTGGGAACTCAATTTCGACTTCCTTCCAAACTACTGCTACAACTCATCCACAAACAGATTTGTTCGCACATCATATGCTTTAGTGGAAAAAGTTTCCAGAGAACAAGCCCCAAAACAAGCGTATCATTATTTCTTCGGTACAAAACTTCAAAATTCCGTGTTTAACGCCATCGGGTCACTGTACAGTAACTTTGTCGGTGAGATTCATTTTGCTTGCATGGCTCGCTTGCTGGGTTACCAGGGAATTGCTGTGGTGATCGAGGAACTCCTGAAGATTATTAGGAGTGTGCTTCAAGGCCAGCTTCAATCATACATCGCCCAGCTCATTGAAGGAATGCCTAAGAAATGCGGCCTTCCTCGCTTTGAGTACGGATCCACAGGTGTCCTTGAATACTACCACGCTAGCCTTGAACCGATCATGCAGTACCCATACCTGAGGACAGACGTGTTTCAGGGATTCAGAGAGATCGGTAACGCCATTCTCTTCTGTCTCCAACTCGAGGGCTTCTTGTCCCAAGAGGAGATTATGGATCTGTTGCACGCTGCACCATTCCAAGGAATTATTCCCAGGCCATATCTTAAAGacGGCGAAAAGCTGGagaacaaaatgaagaaactCGAGACGCAGTACAATTCTCTGCAAGTTTTGTCAACCATTACCAAGCTTGGAACAAAAGAGCAAATAGTGAACGCCCAAGAGGGCGATCTGTTGACGAAAGAGAGGTTATGCTGCGGACTGTCCATCTTTGAGGTGGTACTCAAAAAGATTAAGACGTTCCTGAATCATGAGATGTGGATAGAACAGCCGCCTGCTAACGGTGTCATGAACATTGACGAGTGCAGAGAGTTCCACCGTCTCTGGAGCGCGATTCAGTTCAACTACTGTCAACCACTGCGACAAAACGAGCTCACAGTCGAGGAGTGCTTTGGTGAAGGTCTCAATTGGGCCGGATGTACACTCATTGCTTTGCTAGGGCAAGAAAATCGTTTCGAAGCGCTAGATTTCTGTTATCATATCGTCAAAGTGTACGCCGTGGATTCTCGAGACGAAGTTGTCGGTGGCGTGGACCTCAAGCGTCTTGTAAGCAGAGCTCGTCACTTCAGAGTATTGAATGACCAGATCTTCGCCGTGTTAAACAAACACCTCAAGTCCTCGGACGGGCCTGTGGAACATGTACGCTGCTTTCAGCCGCCCATCCACCAAGCATTTGTTTCTCCAATCTGATCGTGCTGCCCAATGCTCACCGAATCGAAATATACTGCATCGCTCGTATGCAAAATAGCCAGTGTAAAAACAAATGTAAAGAAACATTGAGAGACCAGTTTCGGAATGTAGACTGGTAATTAAGAATAGGGGCCATATTTTAAagatgctttttttttctattcacGCACTCTCGCCTGTAGaattaaaaacagaaaagcGAAGTGTCAAGAATTGTTCTTCCCGGTATCCATTTCAGTCCTGTTTTCCAGTTCTCGTAAGGCTGTGCTTCCAAACTAACCCAGTCAAACCCGGCGGTCAGTTAACGAGGCTTtatatgaaaacaaaacaaagagaaataGGATAAATCCGTTGTTTCAATTGGAGGtagcaaaaaatattaatcttttttttaatattgtctTAGTGGCAAAAGAAGAGAAGCACGGTTATTAGTGGTTGAGATGTATCAATGTATATAAAATTGGACAGTATTTTATTTGTattctttgtaataaaattgcCAGTGGTCCTTGTCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5SQX6	Cytoplasmic FMR1-interacting protein 2 OS=Mus musculus OX=10090 GN=Cyfip2 PE=1 SV=2
Q6GQD1	Cytoplasmic FMR1-interacting protein 2 OS=Xenopus laevis OX=8355 GN=cyfip2 PE=2 SV=1
Q5R414	Cytoplasmic FMR1-interacting protein 2 OS=Pongo abelii OX=9601 GN=CYFIP2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003271 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07159 all species →	CYRIA-B_Rac1-bd	CYRIA/CYRIB Rac1 binding domain	Domain	Interproscan
PF05994 all species →	FragX_IP	Cytoplasmic Fragile-X interacting family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008081 all species →	Family	Cytoplasmic FMR1-interacting	Interproscan
IPR009828 all species →	Domain	CYRIA/CYRIB, Rac1 binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12195 all species →	CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030833 all species →	Biological Process	regulation of actin filament polymerization	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0000340 all species →	Molecular Function	RNA 7-methylguanosine cap binding	Interproscan
GO:0000902 all species →	Biological Process	cell morphogenesis	Interproscan
GO:0006417 all species →	Biological Process	regulation of translation	Interproscan
GO:0031209 all species →	Cellular Component	SCAR complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05749	CYFIP; cytoplasmic FMR1 interacting protein	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.