Gene detail

Detailed information of ENSOFVP00000035457.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_027058530.1, pericentriolar material 1 protein-like [Pocillopora damicornis]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000038452

ATGGCTGGGAGAATCCCACCAGATGAGGCAAGCCGATCGTCACAAGTATTTCGTGGACCATTTTCAGAGCCAACGTCACAACGGCGGGCACCACGCCAATATCCTGCTAGTTTGGATACTGATTTAAGCCTGGTTACAGAGTTACGCAGGTCTGAAGAGCAAGCTGCTGGACAAAGATCCTTGCCTAATAATTTGGGATGGTCATCACGAGGGACTACTGTTCAGCAGAGTCCAAGTGgtgcaaataagaaaaaaggaaagcacTTTGAACAAGTGAAGCTGCCAGCAAAGAGCAGTATGGATTCACCTCCTTCTGATCCTGTTGGTTTTACCCGGAAACGTCATCATACACCTCACACTGTTCCTAGGACACGACTTCCAGCTGGTACTCCTCTGGCTGAAAGGCTAGCAATGGAAAGTTTGAGGCAGCCGTTGTCTTTTGAAGAAGAGCCTATTGACCAGAGTTCCAGAAGCAGAGCCTCGCGAACTATGCAAAATCCATCCACTAGTACTGCAAACAATGAGCGAACACTACCTACACAGAGGAGAACGTCAGCATCTGCTAGTTTACCCGTGTTGGAGATGAATGAAACAGAAACAACAAGAGTTTCCACCGAAGGTGCCATTAATTCAACAAGCTCCAAGGCCAACACACCATTGATAATTGCAAGACTAAACCAAGTCAGGGTAAGACACAAACAGTCttgtcaaaaatgttttttgtcaTCTTCTTCCGACACTgattgtTCTAGTGAACTGAATGAACAGTCAACTAAAATTGCAAGGTTAATCAGACAGCTAAAGCAACAGGAAAAGGCTTATGTGGAACTCCTTGAGCGATCAGTGGTGAGTTATCTTGAAGGACGAAAAGCATCTATACGAGATGAAGAACTTCAAGGACTGCGTCAACAGCATGCCTTATTGAAAAAGATGTTAGAGCAGCAACAGCAGCTGAAAGAGCTACAGACTAGACAAGCAGCTCTGCTGACTTTGCAGCGTGATGCAGAGATACGTTTAGCTGAAGCTGAGgaagagGGTCGACAAGTGTCTGATGAAGCAGGAGCTATTGGTGGGGAAGATGATGATCAAAGTAGAAGTGTAGTTGCAGCCTCTCAAACATCATCGCATCCTGATACAATACCTGAGAGAGCAGGTGCTAGTTTGTTCTCAGATGACAGCCGATTTACACCAGAAGAAATGGAACTTGTGAACCTTCTTAGGATGCATAAAGAGAAGTGGAGAGCTGCTGATTCTGGAGATGAAAAAGAGATGGATGAAAGAGAGAACCATAGAGCAAAGAGAACAAACCAACCCCTAGCAACAACAGCTGTGAATCCTGAAACTGGCACAGAGGTTGCAGATAATGAGGCAGCCTTAGCTCTTGCGAATGCCACTCAAGAGAGATTGGAGCTTGAGAACAAGCTGATGGTTTTAGAGGCAAAGAAGGAGCAGATGGACACCTTGTTGAGAGAATTGCAGTCACTGAAAGAAGCACAACTTAGAAAAGAAACCTTAGAGGCTGGTGGTGTGACTAATCCCAGTGTCAATGAGTCTAAGCAAGAGGAGGATGAACCACTAGCCACTACATCACAGAAGCTTGATGATGAACGGATATTGGAGGCTCTGGAGGTCCATGAAAAACTCAAGAAGCTGCAAGAAGTGAGGGATAGACTGAATCAGTTAAGAGACCTGATTGGCCATTATCAGCCTTCGCTGAATGAGGCAGATAGACCAGAAAATGTTCCACAAACCCACACTGGGACTGAGCTACTGAGTGTGCCTGTTCAAAGCAGCGATGAGCCTGAGGAGCTGGAAGGTGCTGTGGGAGGGGCTGCTACTGGTACAGACCAGGACTTCAGCAGTATTGAATGGATGTTAAGTGCTGGCGTTGAAGATCCCGACCTGATGGGGAAGATAAGGCAACTTCAGGAAGCAAGAGCAAGGGTTGCTCATCTTTTTAAACAGACAAATGAAAGTGTTCAGATGTCTCCTTCAAGAGTGAACAACGAAGTTGTACCAGTACAAGCAACAGAGGAGGAATCTGAAGCGGAGACACAGACAGACACTGATGCAGAGAGTGCAGTTAGCGCTGGCAGTTCAAGTGTGAATGCTATGGCTTGGCAAGATGATCCCGAATTTCAAGCCAAAGTCAGGAAGCTCaattctgcaaaacaaaaactaaaacaactTCAAGAACTTGTGAAGAAGATACAACAGTTTCCAGAAACATCACCAGCTCTACCAGCAGAGTTGGCAGAGTTGAGCTTTGACGAGGACGAttttgatgatgacgatgatgatgatgatggtgatgaggaggaggaagaagaggagGACGAGGAAGAAAGAGACGAAAGCAACAGATCTGAGACTTCAGGTGACAATGAGGAAGAAGACCGGCAGAATGAGGATGATGAAGTCACTACAGGTACCGAAGATGAAGAGGCTGGTGGAGATGCAGCAGTGGTTACTGCAGCGGCCACAGCTGCAGCGGCTGCGTTGAGTCTGAGGAACAGAATGCTGGATCTTGAGGGTTGGTGTTTAATTCAACTGATGCTACTTCATTTTACCCACTCAATTTGTATGCTAGGGCTTTATATTAGCTCTGAGGTACATAATCAAGATGCCAGACCACAAAAACCTGAGACAGCTGGATTACTCCGGCATGATACTTTCACCATTGGTAGATCAGCCGAGTTGAAGAGACCAATCATTCATCAGCCTGTTAATCGAGAAATGTCAACCCAGACACCGTTTTACGGCATTGATTTGAGGGCAGCCAGATCTATAGACTCCAGCGAGCCCCCGAGAGCTCGTCCAAGTGCACTAGTTTGGTCAGAACTGAGACGTCAGAGGGAACTTCACGAGGAAAAGCTGAAAAAACGAAAGCAGAGGTTTTTGGAAAAACGAAAGAAGGCTGGCTTGGACGATGTTTCTGAAGGTGGGACATACTCTGTGAGGAGTGGAAGAAGTGGAGACTTAGATGAAGGGTTCGGTGTGAGCATGATGAGTGCTGATATCACCACAGCTACGTGGGGAGGCTCTACCCAACCCAGCAGTACGCAGAACGACTCGGCAGTGTCAGCAGATGAGTCTGATGAGGAGAACCAAGGGGCAGAGATCGCAGTGGAGGTGGAAGATGATTATCCTGACGGAATAGTTCAAGcagaagaggaagaggaagagcgTCTTGAACCAGAAGCTTTCTCTGGAGGAGCTCAGGCAGTGTTCAGGAGCAGAGAAAGAGTGCCTCGTATGACAGCCTTCAGAGGCAGTGTAGACAGCGCCTCACAACCTAGTAGCGGCAAGAAACGCAAGCTTAATGGAAGCGCTATATCAGGTGGGGCCCGAAAAAGGGAACGAGAAAGAGGACTTACATTTGAAGACTGGCCTAGAACATTCTACTTTGATAGGAATTCAAGAGGAAGAATCAGACAAGAAAACTTTACACCAGCTGAGCAGCTTATCAAAGAACGCGAACAAGAACAGTTTAACATGGAACGCCAAGCATGGGAACAGCACTGTGAGCGTCTTCACCAGGAAGTCACCACCCTCACCTCCCTGTGCAATGGGCTCCTCAGGGATCAACAAATGCTGGTGTCCACAGTGATTGGCAGAAATGTTCCCAGCGGGCCTGCTTCAGGTCCTGCGTTTCAGAACTTTGCCAGCCCAGTACCAGGTCTAGGTGGGAATCCATTCGAGCAGTATCAACAGAGGCAACAAGAAGCCTACCAAGGACTCCAGAGTTTCTTCGATCAACAGCGCTACATGCAGCAGCAACATCAGATTCTTCAAAGCCTCAATCAGTGCTATTCTCAGCTTCAACAACAACACCAAGACATGGCGACCCTTCAGCAACAATTTCAACAGCTGTTTACTTACAATCCTTCCGCTCTTGGTAATAGCAATCCGTCACCACATAGACCCCAGACTGCGTCCCCAAGCGTCATCAACAACGCATCTCCGTCGTTCATGAGTCTGCCGTCGCACAGTGTGTTGCAGCCACCTTCCTCAGCTCCTGTGTTTAGTCAGGCCCCTTTTACGAGTGCATATCAACCACCTTCATCAGCTCCGTTGTTCAGAACTGCTTGGCATCCTCCGTTCGGCCAGCAGGTGGgcaattccagcactgatcaaatgTCAACTCAAGAGTCTTTCAGTGTAAACCCAGACACAGGCATACCAAGTCCAAGATCTACTGCTCATCATGGGCATCCTGTTGAACCTGCGCCTCCCCCTACCTCGACAGGAATAGCCAACCCAGTAATGGTGGTTCGGGAAGTTGGCCCTAGTGTGATAGGAGTGGGTCTGTCTCCTGGTAACATCAGACAGGAACGAAAATACGATCCCAGTTCATACCAAGAACTGGCATCTACAAGTGCAAATGCAACTAAAACAGACAGCAGCGCGGATGTGATCGGTCGCACGTTTAACACACCTCTGAGGGCGTCAGCTGTAGCCAACCTTGCACAGAAGGATAAATCAGCACAGAAGAGCACAGCGGTTAATTTGGTACAGAAGCTCGCAGCAGAATCAGTGGAAACGTCTTCAAGGGCGTCCAGTGTACCCGGAGACGCGCATGATGTGGCAAGAGGctcTTGGCAAGATGCAGAAAGAGCCTCAGAAGCTGGAAGTGAGTTTTCGCTTTTTGAGGCACTCAGAGATTCTATCTATTCCGAAGTTGCAACCCTCATTTCTTTAAATGAGTCCAGGCCACATTTTCTGCTTGAGTTGTTCAGGGAACTGCAGCTGTTGACTTCAGACTACCTGCGGCAGCGCGCCCTGTATGCGTTACAGGACCTGGTGACGAGATTTTTAACCGAGGATTCTGTCGGTGCAGAAGGAGCCCCTCTGCAGCAGGCACGATTCCAGGAATGGTTGAACTCTAACTCTGAACTGACTCCAAGTGAAACGGTCGAGACATTTGAAGACGATGAATCAGAGACCAGAGAGGGCGCAGTTCCTGCGGAAACCGTCACGGAAGGAATCTATGACTATGTAGAGAATGTTGAGTCTGGAAGCACCCTCTCCACCCCTACATCCAGTCACACGGGAGAGGCACCATTCGCCTCTGAAGGCCTGGGAGACACTGTTATACACCTGGACAAGGCGCTGAGCAGGATGCGAGAGTATGAAAGACTGAGAACTGAAGGGAAACTGAGTGAATTGATGACCGGTCCTTCTGTGTTGAAGGACAAGATCGTCAAAGATGACGTAACCACAAGCTCTGCTGGTGATGTGGGCAGCGAATCCTCCATATCAGATGTGCAGTACCCAAGAATTGACACTCAAGCCCTGGATCATCTTATCAAGTCCATTATGTCGgAAGTGATTCCTTATCTGAATGAACACATGGAAGATAACTGCACCTCTGAGCTGCTTGGTTACATCAGAAACCTCGTGTTATCAAGGATTCAAGTCAATGAAGAACAGGAATTTGGCAGATTCTTCCACAAACAGCTGGCTTCCATTCTCCAGGACTCACTCTCTAGATTCACAGATAGGAAAATGAAAGACTGTGGAGAGGATATGCTGGTAGACATGTCCGAGATTCTGTTCAACGAGCTGGCGTTTTTTAGACTCATGCAGGACTTAGACGGTCGAGGGGCAAGTCAGAGACCAACTTGGAGACAGGGATTTGATTCTGCCAGCACTGACACTGGGACAGGTCAGGACGGAGACAAAGAAGATGGCGATGATACGGAGGAGAAGGACGAGAATCCCCCCGAAGACAGTGCTGTGGAGGAAGAAGGAGTCGGCGCTGCTGATGAACCTGAAGAGGCAGAAGGTGAAGAAGTGGAGGAAGATGAGGGaaatgaagaagatgaagaaagcAGCGAGGATTCCTCTTCATCAGAAGAGTCAGGAGCTGAAGACGAGGGTGCAGATGACGAAGGACCAGAAGATGAAGAAGAGACTGAGGAAGGTGTGGCTGCCTTGCCAATTTCTAAAGAGCAGCAAGAAGCTGAGGAAGAAGATCTGGGAAAGGTTTGTTAA

Transcript

ENSOFVT00000038452

Protein

ENSOFVP00000035457.1

MAGRIPPDEASRSSQVFRGPFSEPTSQRRAPRQYPASLDTDLSLVTELRRSEEQAAGQRSLPNNLGWSSRGTTVQQSPSGANKKKGKHFEQVKLPAKSSMDSPPSDPVGFTRKRHHTPHTVPRTRLPAGTPLAERLAMESLRQPLSFEEEPIDQSSRSRASRTMQNPSTSTANNERTLPTQRRTSASASLPVLEMNETETTRVSTEGAINSTSSKANTPLIIARLNQVRVRHKQSCQKCFLSSSSDTDCSSELNEQSTKIARLIRQLKQQEKAYVELLERSVVSYLEGRKASIRDEELQGLRQQHALLKKMLEQQQQLKELQTRQAALLTLQRDAEIRLAEAEEEGRQVSDEAGAIGGEDDDQSRSVVAASQTSSHPDTIPERAGASLFSDDSRFTPEEMELVNLLRMHKEKWRAADSGDEKEMDERENHRAKRTNQPLATTAVNPETGTEVADNEAALALANATQERLELENKLMVLEAKKEQMDTLLRELQSLKEAQLRKETLEAGGVTNPSVNESKQEEDEPLATTSQKLDDERILEALEVHEKLKKLQEVRDRLNQLRDLIGHYQPSLNEADRPENVPQTHTGTELLSVPVQSSDEPEELEGAVGGAATGTDQDFSSIEWMLSAGVEDPDLMGKIRQLQEARARVAHLFKQTNESVQMSPSRVNNEVVPVQATEEESEAETQTDTDAESAVSAGSSSVNAMAWQDDPEFQAKVRKLNSAKQKLKQLQELVKKIQQFPETSPALPAELAELSFDEDDFDDDDDDDDGDEEEEEEEDEEERDESNRSETSGDNEEEDRQNEDDEVTTGTEDEEAGGDAAVVTAAATAAAAALSLRNRMLDLEGWCLIQLMLLHFTHSICMLGLYISSEVHNQDARPQKPETAGLLRHDTFTIGRSAELKRPIIHQPVNREMSTQTPFYGIDLRAARSIDSSEPPRARPSALVWSELRRQRELHEEKLKKRKQRFLEKRKKAGLDDVSEGGTYSVRSGRSGDLDEGFGVSMMSADITTATWGGSTQPSSTQNDSAVSADESDEENQGAEIAVEVEDDYPDGIVQAEEEEEERLEPEAFSGGAQAVFRSRERVPRMTAFRGSVDSASQPSSGKKRKLNGSAISGGARKRERERGLTFEDWPRTFYFDRNSRGRIRQENFTPAEQLIKEREQEQFNMERQAWEQHCERLHQEVTTLTSLCNGLLRDQQMLVSTVIGRNVPSGPASGPAFQNFASPVPGLGGNPFEQYQQRQQEAYQGLQSFFDQQRYMQQQHQILQSLNQCYSQLQQQHQDMATLQQQFQQLFTYNPSALGNSNPSPHRPQTASPSVINNASPSFMSLPSHSVLQPPSSAPVFSQAPFTSAYQPPSSAPLFRTAWHPPFGQQVGNSSTDQMSTQESFSVNPDTGIPSPRSTAHHGHPVEPAPPPTSTGIANPVMVVREVGPSVIGVGLSPGNIRQERKYDPSSYQELASTSANATKTDSSADVIGRTFNTPLRASAVANLAQKDKSAQKSTAVNLVQKLAAESVETSSRASSVPGDAHDVARGSWQDAERASEAGSEFSLFEALRDSIYSEVATLISLNESRPHFLLELFRELQLLTSDYLRQRALYALQDLVTRFLTEDSVGAEGAPLQQARFQEWLNSNSELTPSETVETFEDDESETREGAVPAETVTEGIYDYVENVESGSTLSTPTSSHTGEAPFASEGLGDTVIHLDKALSRMREYERLRTEGKLSELMTGPSVLKDKIVKDDVTTSSAGDVGSESSISDVQYPRIDTQALDHLIKSIMSEVIPYLNEHMEDNCTSELLGYIRNLVLSRIQVNEEQEFGRFFHKQLASILQDSLSRFTDRKMKDCGEDMLVDMSEILFNELAFFRLMQDLDGRGASQRPTWRQGFDSASTDTGTGQDGDKEDGDDTEEKDENPPEDSAVEEEGVGAADEPEEAEGEEVEEDEGNEEDEESSEDSSSSEESGAEDEGADDEGPEDEEETEEGVAALPISKEQQEAEEEDLGKVC

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8AV28	Pericentriolar material 1 protein OS=Gallus gallus OX=9031 GN=PCM1 PE=2 SV=1
Q9R0L6	Pericentriolar material 1 protein OS=Mus musculus OX=10090 GN=Pcm1 PE=1 SV=2
Q15154	Pericentriolar material 1 protein OS=Homo sapiens OX=9606 GN=PCM1 PE=1 SV=6

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002504 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15717 all species →	PCM1_C	Pericentriolar material 1 C terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024138 all species →	Family	Pericentriolar material 1 protein	Interproscan
IPR031446 all species →	Domain	Pericentriolar material 1 protein, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14164 all species →	PERICENTRIOLAR MATERIAL 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0007098 all species →	Biological Process	centrosome cycle	Interproscan
GO:0034451 all species →	Cellular Component	centriolar satellite	Interproscan
GO:0034454 all species →	Biological Process	microtubule anchoring at centrosome	Interproscan
GO:0035735 all species →	Biological Process	intraciliary transport involved in cilium assembly	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0071539 all species →	Biological Process	protein localization to centrosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16537	PCM1; pericentriolar material 1 protein	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.