Gene detail

Detailed information of ENSOFVP00000035668.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020609908.1, translation factor GUF1 homolog, mitochondrial-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000038677

CAGGTACAATATCAAGAGACAGTGACAATAAGCAAGTGCTGGACAAACTTCAAGTGGAAAGGGAGAGAGGAATAACGGTCAAGGCACAGACTGCATCACTGTTTTATAATGATGATGAAGGGGAAACTTATTTATTAAACCTTATTGATACACCAATTGACCTGAAGAGTGCTGATCCTGATGGTGTTTCAAGCCAAATGGAAAAACTCTTTGATGTCAGAAATAAGGATATTTTAAGAATCTCTGCAAAAACAGGTATTGGAGTTGAAAATATCCTAAAAACCATTGTTGAGGAACTTCCTGGTCCTCAGGGTGATCCTGGAGCTCCACTGAAAGTGCTGTTATTTGACTCTTGGTATGATCATTACAGAGGAGTGATCTGTCTTGTTGCTATTCTGGATGGATCACTGAAAAAAGGAGACGAAGTTATATCTGCTTACACTCAGCAGAAGTACGAGGTGTTGGATGTTGGGATTATGCACCCTGGAGAAGTCTCCACTGGTGCACTATTTGCTGGCCAAGTTGGCTTTGTAGTCTGTGGAATAAGGAACAGTAAAGATGCTCAGATTGGGGACACATTCTTCCATCCTCATACACCTGTGGAACCCCTGaagggattcaaacccatgagtCCTATGGTGTTCGCTGGCGTGTACCCTGTTGACCAATCCGAGCATCTCTATTTAAGATCTGCTATTGAAAAGCTCACGTTGAATGATTCCAGTGTGTCTGTTAACCCTGACAGTTGCCTTGCCTTAGGCCAAGGATGGCGACTTGGTTTCCTCGGCTTGTTACATATGGATGTTTTTAAACAACGACTAGAGCAGgaGTATGGTGCATCAATAATTATTACTTCTCCAAATGTTCCTTACAAAGCAATTTTGAAAAGTGACGAGACTGAAGTAGAAGTTTTGAATCCTTTGGAGCTTCCAGATCCCTCTCGGGTACAGTTGTATTTGGAGCCTTATGTACTGGGCACGATTGTGTTTCCTGAGGAGTGTATGGGTAAAATGCTAAGTCTTTGCGAGAGCAGGCGCGGTGAACAACAAGAGGTGGTCTACCTCGACGACTCACGTGTCATGCTAAAATACTTGTTACCGCTGAACGAAGTCATTGTGGACTTCTACGACGAACTCAAAACCCAATCATCTGGTTATGCAAGTTTCGATTACGAAGATAAAGGATATAGGGAAACCAACATTGTACggATGGATATTCTAATAAACGGCACAGCTGTTGATGCGTTGAGTTGTATAGTTCACGCAGACAAGGCGCTGCAGTCAGGACGAACCATGTGTGCTAAACTAAAGGACGTTATTCCTAGGCAGCTATTTGAAGTAGTGATCCAAGCTTCAATCAGAGGGAAAATCACAGCAAGAGAAACTATTAAACCTGTGAGGAAGGACGTCACGGCAAAATGCTATGGCGGTGACGTCACGCGCAAGATGAAACTTCTTCAGAAGCAGAAAGAagggaaaaagaaaatgaagagaATAGGAAAAGTAGATGTTCCTCACGAAGCCTTCCTTACGATACTAAAGAGATGACACTAGTAGAAATAGAGACGTACCTTTTTACATTGTAACTCGttcctttctttcttccttCGAGAGACGCCTAAGAATCCAGACTGATCGCATATGTGATGGACTCGTATGAGGTCTGTAATTGGTTGTAATTATCTTGCGAGAGACAATAGGCTATTACAATTGTGAACTTAGTTACCTGGCCTTTGAGTGTAAGCGAGGCTGGAGGGTAGTTAGTATAAGAACAACAGGATCACCtgcagcctcgctgccattcaaaggccaagTTACTGAACAGAGAACTGTCAAACGGTCTATTCATCCAAAATTGATCGAAGGAAAATTTTCAATTAAATACTGCTTTTTTAACATGTTCAAGTTTACTGTAAATCCCTTTGACCAGGCAGATTGAGGTGCTCATCTGTTGAATGTAAATGTTGAAAGAGAACgtccaataaaaacaattcagTATACTTTTTTATTGCAGTTTGTTTGCATGAATGGCGATTCTGCCATTCACCTGTTACACCAGTTACACTTGGAATTTTTTCTGGCAGTTGCTCACCTCATTCTTCTGTctacaaaaaggaaaacaaacttgTTCACATCATCtcactgataaacaaaattgTGCTTAGAAACCAAGCAACGAAAGAATCTGCTTTTGACAAAATTATCGCAGACTTCAATACTATTATCAGATCTAATCCGTGTGCCTCGGTATATGCTTCTGTAGCCAGACTTGGGAAATACGAACTTTTGATGTGAATGGTAAATAATTTTGTCAACGTAACATACTAAAAAACCTCTGAGGCAAGACTAAATGCTGTGACAATAACTAGGGAAGTGCACCCTTATTATATGAGAGTGCACGTTCTTATTTTATAGGCAATGCATTCTTTGAAGAAGTCATCCGCTGTTCCTGTCTTCAAACTACAGGCTTAATAATGTCAGCGGCAGACATTATAGCTTCGGTTACCAACGACAACTGCTCTTTAACTGCATCGACATTTCCAGTTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B3RXR7	Translation factor GUF1 homolog, mitochondrial OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_56304 PE=3 SV=1
Q8N442	Translation factor GUF1, mitochondrial OS=Homo sapiens OX=9606 GN=GUF1 PE=1 SV=1
A6QLJ3	Translation factor GUF1, mitochondrial OS=Bos taurus OX=9913 GN=GUF1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002510 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06421 all species →	LepA_C	GTP-binding protein LepA C-terminus	Family	Interproscan
PF03144 all species →	GTP_EFTU_D2	Elongation factor Tu domain 2	Domain	Interproscan
PF00679 all species →	EFG_C	Elongation factor G C-terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006297 all species →	Family	Elongation factor 4	Interproscan
IPR038363 all species →	Homologous_superfamily	LepA, C-terminal domain superfamily	Interproscan
IPR035654 all species →	Domain	Elongation factor 4, domain IV	Interproscan
IPR035647 all species →	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR013842 all species →	Domain	GTP-binding protein LepA, C-terminal	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR004161 all species →	Domain	Translation elongation factor EFTu-like, domain 2	Interproscan
IPR000640 all species →	Domain	Elongation factor EFG, domain V-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43512 all species →	TRANSLATION FACTOR GUF1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:0045727 all species →	Biological Process	positive regulation of translation	Interproscan
GO:0097177 all species →	Molecular Function	mitochondrial ribosome binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000035668.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.