Gene detail

Detailed information of ENSOFVP00000035845.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020604404.1, regulatory-associated protein of mTOR-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000038865

ATGTCAACGGACGATTTCGACTACGACGATTTGTTTTGCGATGAGGACGAAGGCGAAATAGTTGACTGGCAATTGCCGCTATGTTTCATGAAGAAACGCCACAAAGAGGTGATCGAAGGATCGAGACCATTGGCTCAGACATGGCGTATGAAAGAACGAATGAAGACCGTTAGCGTGGCTCTCGTCTTGTGCTTGAACATCGGCGTTGACCCTCCCGATGTGGTTAAAACCTCACCATGTGCACGGATGGAGTGCTGGATCGATCCTCTTTCAATGGGTCCACAAAAAGCTTTAGAAACTGTTGGCAACAAACTGCAGGAACAATATGAACGCTGGCAGCCAAGGgCACGCTATAAGCAGAGTCTTGATCCCACAGTTGAGGAGGTGAAGAAACTTTGTACCTCCCTGCGTCGAAATGCCAAGGAGGAGAGAGTACTCTTTCATTATAATGGGCATGGAGTTCCAAGAGCAACTGCCAATGGTGAGATTTGGGTCTTCAACAAAaGCTACACCCAGTACATTCCGCTGTCAGTGTACGACCTACAAACATGGATGGGAAGTCCATCAATCTTTGTTTACGACTGTAACAATGCTGGACTCATTGTccagtcattcattcagtttgctGCTCAACGTGAACAGGAACAGGAGCGTTGCTTGGCCCAGGGTACTCCTATGCCAGTTCCACTTGCTGTCAAGAACTGTATCCAGTTGGCGTCATGTGATGCAAACCAGCTGTTACCAATGAACCCAGAGCTACCTGCTGACCTCTTTACTTCCTGCCTAAGCACACCTATCAAAGTGGCCTTACGATGgttttgtAGCCAAAAAAGTAGCAAGCTTGTACCTGGTATTACTCTTGAACTTATTGAAAAGATTCCTGGTCGTCTTAATGACAGAAGAACACCATTAGGAGAGCTGAACTGGATATTTACTGCTGTAACTGACACCATCGCTTGGAATATGTTACCGAGagAGCTCTTCCACAAGCTGTTCAGGCAGGATCTATTAGTTGCAAGCTTGTTCAGGAATTTCCTTCTTGCAGAGAGAGTGATGAGATCTTACAACTGTACTCCAGTGTCAAGTCCCAGACTTCCTCCCACCTACATGCATCCAATGTGGCAAGCATGGGATTTAGCTGTGGATATTTGTCTGTCCCAGTTACCAGATGTGATTGAAAACCCAGGAAGTTTTAAGCATAGTCCGTTCTTCGCAGAGCAATTGACAGCATTCCAGGTATGGCTTGCCATGGGTGCAGAAGACCGCGACCCTCCTGAGCAGCTGCCAATAGTTCTACAGGTTCTTTTGAGTCAAGTGCACAGACTCCGAGCACTTGATCTGCTTGGCAGATTCTTGGATTTAGGACCCTGGGCTGTCAATTTGgCTTTGTCTGTTGGCATCTTTCCATATGTGCTCAAACTTCTTCAGAGTTCAGCCAGAGAGTTAAGACCCCTTTTGGTGTTCATCTGGGCAAAGATCTTAGCTGTTGATAGTtCTTGCCAAGCAGACCTAGTTAAAGATAATGGTcataaatattttttatctGTGTTGGCAGATGCATACATGCGGgctGAGCAGCGTACAATGGCAGCATTTGTATTGTCAGTCATTGTGAATGAATATCCAATTGGTCAAGAAGCTTGTGTTCAAGGCAATCTAATTGCCATCTGTCTGGAGCAGCTGACAGATCCTTACCCTCCCTTGCGGCAGTGGCTGGCCATATGTCTTGGCAGGGTGTGGTTCAATTACGAGGCTGCCAGGTGGTGTGCCGTGAGGGACAGTGCACCAGACAAACTGTACTGTCTGTTGTCTGATCCATTGCCAGAGGTTCGTGCTGCAGCAGTATTTGCTTTAGGTAGATTTATAGCCAATACTGGAGATAGATCTGACCAAGCAAATCAGATAGATTTTGGAGTGGCAATGACATTGACACAGTTGTCTCAGGATGGAAGTCCACTTGTTAGAAAGgAATTGGTTGTTGGTCTTCATGGCCTGGTGATGCAGTTTGAAACTAACTTTGGTGTAGTGGCTCTTCAATTCCTTGAGGAAGATCGCCAAAGAGAAAATGCGCCCCCTGCAGCAGCAATCACACCCAGTGGTTGGATTGTCGTAGGTTCTGGCCCATCATCAAGTGCAGAAGGTGTAACAAACGCAATCCCTGGAAGTGACAGGAAGGGTTCCAGGGGACTGCGTGCAAGCTTTTCAACATCTCATCTCAGCAACTTTGCAACCAATCCTCCTGTTGTTAGTGGTCAACACATTGCGCCTGCTCTTATGACATACAGTAGTAGCAGTGGCAGCTCTGGTAGTAATGAACTTGTGTCGAGCATGAAAGATCTGCGGCGGTCTGCCTCCCAGAATTCACTTTCCTCCAGTTTCCAATCCAATGTGTATGCCAACGTTTGGAAGGCTCTGCTCAATCTGTCCGTCGATCCATTTGTGGGTGTTTCTGAAATCGCCAAAAAGATAGTCAATGGCATAACCTTAAAGGCCACCATTGCGGCTTGTCCTCAAAGGATCACCTCGTCAGTCTCCAACCTTTCCATATCAGCTCCATCGTCACCCGGGAGATTCTCAATGCCTCATCACGCAAGCTCAGACCCTGGCATGTCGCCTCCCCGTCATAGCAGTTCTAATGAGACACCTCGTTCAATGAAAGGTGATTCGATTCAGGCTAAAGTGCCCACCCCTGGTCCCCTAGGGGCAGCATTTCCTCACTCGTACGAGTTCCACACAAAACGAAAAATGTTTGACAAAGGCCCAGAGCACAACAAACAACCTAGCAGCGCTAGTGAAGACAACGACCAAGATTCCGACGAAGACGCAGGCTCATCTAAACCTCCCATGATCAGTACTAACTTTGCTGAGTGGTGTGCCAGTTATTTTGCTCAGTCTGTCATGAAGCCTCCTGAGGAACACGATCCTCAAAGTCAGCTGCATCATGAAAGAGAGTGGAGATTTGAAAGGAACTCAAGAGTACGGCGAGAGGCGGCCAAGCAACAAGCTAAAACAGCTTCAGGCAAAGTCGACGACCAGATATTCATCAACAAAAACATCAGTGCTCCGGTACTGTTGAGGTTTCATCCCTACGAGCCTCACTTAGCAGTTGCTGACAGGGGTGGTGTGAGTATCTGGAACTGGGAGGAGGGTGTTCGAATGAACTACATCGTCAACAATAACCCGAAAGTTTCTCGCATCACAAGCATGGACTTCCTTAATGCGCATGACCTGACACTGTTGTTAACAGGAACCGATGACGGTTCAGTTCGTGTGTGGAGAAATCTTGAAGGAGAGACGTATAGTGACAAGAGTTTGGAAATGGTTACAGCCTGGCAGGCGCTGTCTGGAATGCTTCCGTCCACTCGAGGAAGTGGTTCCGGTTTAGTTGTTAGCTGGGAACAGGAGACGGGCATTTTGTTAGCATCTGGTGACGTCAGATTCATTCGAGTCTGGGACACACAGAGAGAGATGAGAATGCAGGACATCCCGACAGGCGCTGACAGTTGCGTGACCAGCTTAGCGTGTGACCCAGTGGGCAGGTCGTTACTGATTGCAGGATGTGGAGACGGCTCTGTCAGACTGTTTGATAGAAGATTGCCGCCGAGTGACAGCCGAGTGATGGCGCTCCGAGAGCATGCTGGGTGGGTGACGGGCGTCTTTCTTCAGAAGAGTGGGGACGGTAACATCATCAGTGGCAGTGTTGCCGGAGACGTCAAATTCTGGGATCCTCGTTTCACGGAATCCGTTCGGACCCTGGAAACTATCGGGAACTCGGCAGCGTTCGAGGTTCATCATCAAGCCAAGGTGTTTGCCACTGGTTCCGCGAGCCAGATGATCAAGGTGTACAACTTAGACGGCGGCAATCTGAGCACCATACGATATCACGACGGTTTTATGGGCCAGCGGATTGGGCCTATTAGTTGTCTTGAATTTCACCCCCACAGGATTCATTTGGCTGCAGGCAGCACGGATTCTTTCATATCGATCTACTCTACTGAGAAGAAGCGGTAG

Transcript

ENSOFVT00000038865

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8N122	Regulatory-associated protein of mTOR OS=Homo sapiens OX=9606 GN=RPTOR PE=1 SV=1
Q8K4Q0	Regulatory-associated protein of mTOR OS=Mus musculus OX=10090 GN=Rptor PE=1 SV=1
Q55BR7	Protein raptor homolog OS=Dictyostelium discoideum OX=44689 GN=raptor PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004375 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14538 all species →	Raptor_N	Raptor N-terminal CASPase like domain	Domain	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR029347 all species →	Domain	Raptor, N-terminal CASPase-like domain	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR004083 all species →	Family	Regulatory associated protein of TOR	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12848 all species →	REGULATORY-ASSOCIATED PROTEIN OF MTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0009267 all species →	Biological Process	cellular response to starvation	Interproscan
GO:0010506 all species →	Biological Process	regulation of autophagy	Interproscan
GO:0030307 all species →	Biological Process	positive regulation of cell growth	Interproscan
GO:0030674 all species →	Molecular Function	protein-macromolecule adaptor activity	Interproscan
GO:0031929 all species →	Biological Process	TOR signaling	Interproscan
GO:0031931 all species →	Cellular Component	TORC1 complex	Interproscan
GO:0038202 all species →	Biological Process	TORC1 signaling	Interproscan
GO:0071230 all species →	Biological Process	cellular response to amino acid stimulus	Interproscan
GO:0071902 all species →	Biological Process	positive regulation of protein serine/threonine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07204	RAPTOR; regulatory associated protein of mTOR	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.