Gene detail

Detailed information of ENSOFVP00000036888.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020626573.1, uncharacterized protein LOC110063919 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IE02	Apurinic-apyrimidinic endonuclease 1 OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=APN1 PE=1 SV=1
A0A509ASK2	Apurinic-apyrimidinic endonuclease 1 OS=Plasmodium berghei (strain Anka) OX=5823 GN=APN1 PE=2 SV=1
Q10002	Apurinic-apyrimidinic endonuclease OS=Caenorhabditis elegans OX=6239 GN=apn-1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008775 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01261 all species →	AP_endonuc_2	Xylose isomerase-like TIM barrel	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001719 all species →	Family	AP endonuclease 2	Interproscan
IPR018246 all species →	Binding_site	AP endonuclease 2, zinc binding site	Interproscan
IPR036237 all species →	Homologous_superfamily	Xylose isomerase-like superfamily	Interproscan
IPR013022 all species →	Domain	Xylose isomerase-like, TIM barrel domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21445 all species →	ENDONUCLEASE IV ENDODEOXYRIBONUCLEASE IV	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003906 all species →	Molecular Function	DNA-(apurinic or apyrimidinic site) endonuclease activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006284 all species →	Biological Process	base-excision repair	Interproscan
GO:0008081 all species →	Molecular Function	phosphoric diester hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000036888.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.