Gene detail

Detailed information of ENSOFVP00000037091.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020618682.1, CCR4-NOT transcription complex subunit 7-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3ZC01	CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=1
Q5ZJV9	CCR4-NOT transcription complex subunit 7 OS=Gallus gallus OX=9031 GN=CNOT7 PE=2 SV=1
Q9UIV1	CCR4-NOT transcription complex subunit 7 OS=Homo sapiens OX=9606 GN=CNOT7 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007565 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04857 all species →	CAF1	CAF1 family ribonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039637 all species →	Family	CCR4-NOT transcription complex subunit 7/8/Pop2	Interproscan
IPR006941 all species →	Family	Ribonuclease CAF1	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10797 all species →	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000932 all species →	Cellular Component	P-body	Interproscan
GO:0004535 all species →	Molecular Function	poly(A)-specific ribonuclease activity	Interproscan
GO:0030014 all species →	Cellular Component	CCR4-NOT complex	Interproscan
GO:0030015 all species →	Cellular Component	CCR4-NOT core complex	Interproscan
GO:0043928 all species →	Biological Process	obsolete exonucleolytic catabolism of deadenylated mRNA	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12581	CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.