Gene detail

Detailed information of ENSOFVP00000037329.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020601338.1, uncharacterized protein LOC110040440 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000040520

atggccttcaaattttatcaaacacgatcaaacagcaccaaacaaggtgtccaaacggtaaaatTGTACGGCTATTCCGCTCTTCATACTGCGGTGATAGCCCGGGATCTTAAAGCAGTCCACACCCTCACAACAACAGACGCAGGATGCAATATTGAGTCAAGGGATGCTATGGGCTTCACAGCTCTTCACTTAGCCACTCTTCAGGGAAATAAAGATCTTGTTGAAACGTTGGTTCAAGTAGGATGTGACGTTAACAGCAGAACAAAAGAAGGGATGACTTCACTACACATTAGCAGTGAACGTACAGGTGGAGCTGAAGATATCCTTCTTGTATTAGTGTCGGCGTCGTGTGACGTTAATGCTCGGAACAAACTCGGCCGCACCGCGCTTCATCTTGCcgcaaaacaaggaaatcttcaaaaTCTGAGGACGCTTCTGGATGCTGGCTGTGACCGGAACATCAAAGACAAACTTGGCTTCACTGCTGTTGGTTTAGCATTCAAGTTTAACCAGAAAGCAAGCGCTGATCTTTTACTCCACTACAAACCTAAGCGGAATCAATCCATTTGTATGGGAACTGTTCCGTGTGCAACCCTTTCTAAGGAAGGTGTATGTGAGAATAGCGAACGTGAAGATCAAAACGACGAGGTCAAACTGTCCGACATGTCAACGCCTGCAAAGATTCAACAAGTTTGTGATAAAACGCTCTTGAAATTCACGGAACATATGACAAGCAGAAATGTTTTGTCTTTGGAGATTTATCATTTGATCTTAACTATTTTGAAACAGAAGCGAGAAGTAATGGATGGCTTAGTCTCCACTACATCCATGAAAACGATCGAATCTGTGGCGGCTATTTTCGAAAGAAAACTCTTGAATCTGAGTTTAACAGCGTCTACTTCGTTCATTCGGTTTCCCTTGTCATCGTACACAATAGCAGCGCTAGACGATAAACTCAGAAAACGACGTCTTTATGATTTAAAACAATATAACTTTGAGAGAAGCGGTCAACTTGGAAGAGATGTGGAGTCAACAATCATAACGAAGTTGATGCAAGGACTTCAAGACTCACTGCGCTTTTCTTCACAACCATCGACGACGCTTTCTAAGCAGAGTTTAACTCTATGTTTGGAATGGAAACCGCAAAAGAAAGAACACACCGtagaaaagtttaaaacttcCGGGCAAATACTGGTTAAAAGTAGCAACGGCCACAGCACTGAAAATTCATTGACAGCGCAGGACTTGTACGACAACTCAGTCTTAGAGATTTCATGTGACCTCACATCATTGCAGAGTCAGTGTAAACAGAAAAGCGGAGATATTGACAATGAAGCGTGTGAAGGATGCCTTAAAAAGCTTAGCAAAACCTTAGCAGTCTTTGGAGATTCAGGGAAAGTCTGGGAAGATGTTTATGAAATTGGAAGCAGTTTTGTAGTGAACAAAAGGGAAAACTGTCTCTCGCGTTTGGATCACATGTTAAGTAACAAAAGTGGATCAGCTTTATTTGCCGAAGATGTTTTAGAAGCCTTCTTACAGCACTCAGACCTCTTTATCTTTTGTCTTCAGGAGAAAGGTTCCTTATTTAGCACGCTTTTGAGCAAAGCACTGCCAGAGGATGGACCCTGGGTAGCAGATAAAATCGCAAAGATTTTTCTTCGAGTCTGCGTCGCTTTGGCGAGTGATCAGCACTTGCTGCTCAGCTGTGCAGCTACTGTTATTAAGCACGGCCTCTTACACGAACATTCTAAGCCTATAGCTCTTGGTACTTGCGTTTTAGCGAGAATGGGGCTTCTTAAACAGGAAGATGATGTGGACATTGTGAAGGACCTAGAGGGTCCTCTCTTGGCCCTAGAAAATCTATTTGCCAAGACGTATTTTCCTAGAGATCTTGCCGCCATCttcgtttcttttctttgcaaGTCAAGCCCAAAGCTGTTCCGATTGGATCAGCTGCGGCTTCAGGCATTAGCCTCCGCCGTTACCAAGGAAATACTTCCGTCTTCAGCTCAAGAAGCTTGGAGTGACACAGGAAAACACTTCAAACGGATTTGCGACATTCTGGCGGTCGAAAGCGACTGGGAACTACTTATGAAGTGTGTCGATGCCTTGTTCTCGCGCGTTTTTGGGACACTGAAATGTCTTGACGTGTGGCCCATTGGCGAAAGCATTCTCATTTATCTTGGTCTACTGAAAAGTGAATTCCATATTGAAACTGTAAGGAATCTTAGCTGTGCTTTAAAAGCACTACATCATGCAGTGAAGCAGAGCTATTTTCCACCTCTTCTAAAACAATTGCTTGGCTGTTTCCTACGAAAACCGAATCCAGCTCTTACGCCACATTCCACAGAAGTCGGCGAGATATTATCTACAATGACCCTTGAAAGCTAA

Transcript

ENSOFVT00000040520

aaaagaaatgttttaagtttgttggtataatgtttgatggccttcaaattttatcaaacacgatcaaacagcaccaaacaaggtgtccaaacggtaaaatTGTACGGCTATTCCGCTCTTCATACTGCGGTGATAGCCCGGGATCTTAAAGCAGTCCACACCCTCACAACAACAGACGCAGGATGCAATATTGAGTCAAGGGATGCTATGGGCTTCACAGCTCTTCACTTAGCCACTCTTCAGGGAAATAAAGATCTTGTTGAAACGTTGGTTCAAGTAGGATGTGACGTTAACAGCAGAACAAAAGAAGGGATGACTTCACTACACATTAGCAGTGAACGTACAGGTGGAGCTGAAGATATCCTTCTTGTATTAGTGTCGGCGTCGTGTGACGTTAATGCTCGGAACAAACTCGGCCGCACCGCGCTTCATCTTGCcgcaaaacaaggaaatcttcaaaaTCTGAGGACGCTTCTGGATGCTGGCTGTGACCGGAACATCAAAGACAAACTTGGCTTCACTGCTGTTGGTTTAGCATTCAAGTTTAACCAGAAAGCAAGCGCTGATCTTTTACTCCACTACAAACCTAAGCGGAATCAATCCATTTGTATGGGAACTGTTCCGTGTGCAACCCTTTCTAAGGAAGGTGTATGTGAGAATAGCGAACGTGAAGATCAAAACGACGAGGTCAAACTGTCCGACATGTCAACGCCTGCAAAGATTCAACAAGTTTGTGATAAAACGCTCTTGAAATTCACGGAACATATGACAAGCAGAAATGTTTTGTCTTTGGAGATTTATCATTTGATCTTAACTATTTTGAAACAGAAGCGAGAAGTAATGGATGGCTTAGTCTCCACTACATCCATGAAAACGATCGAATCTGTGGCGGCTATTTTCGAAAGAAAACTCTTGAATCTGAGTTTAACAGCGTCTACTTCGTTCATTCGGTTTCCCTTGTCATCGTACACAATAGCAGCGCTAGACGATAAACTCAGAAAACGACGTCTTTATGATTTAAAACAATATAACTTTGAGAGAAGCGGTCAACTTGGAAGAGATGTGGAGTCAACAATCATAACGAAGTTGATGCAAGGACTTCAAGACTCACTGCGCTTTTCTTCACAACCATCGACGACGCTTTCTAAGCAGAGTTTAACTCTATGTTTGGAATGGAAACCGCAAAAGAAAGAACACACCGtagaaaagtttaaaacttcCGGGCAAATACTGGTTAAAAGTAGCAACGGCCACAGCACTGAAAATTCATTGACAGCGCAGGACTTGTACGACAACTCAGTCTTAGAGATTTCATGTGACCTCACATCATTGCAGAGTCAGTGTAAACAGAAAAGCGGAGATATTGACAATGAAGCGTGTGAAGGATGCCTTAAAAAGCTTAGCAAAACCTTAGCAGTCTTTGGAGATTCAGGGAAAGTCTGGGAAGATGTTTATGAAATTGGAAGCAGTTTTGTAGTGAACAAAAGGGAAAACTGTCTCTCGCGTTTGGATCACATGTTAAGTAACAAAAGTGGATCAGCTTTATTTGCCGAAGATGTTTTAGAAGCCTTCTTACAGCACTCAGACCTCTTTATCTTTTGTCTTCAGGAGAAAGGTTCCTTATTTAGCACGCTTTTGAGCAAAGCACTGCCAGAGGATGGACCCTGGGTAGCAGATAAAATCGCAAAGATTTTTCTTCGAGTCTGCGTCGCTTTGGCGAGTGATCAGCACTTGCTGCTCAGCTGTGCAGCTACTGTTATTAAGCACGGCCTCTTACACGAACATTCTAAGCCTATAGCTCTTGGTACTTGCGTTTTAGCGAGAATGGGGCTTCTTAAACAGGAAGATGATGTGGACATTGTGAAGGACCTAGAGGGTCCTCTCTTGGCCCTAGAAAATCTATTTGCCAAGACGTATTTTCCTAGAGATCTTGCCGCCATCttcgtttcttttctttgcaaGTCAAGCCCAAAGCTGTTCCGATTGGATCAGCTGCGGCTTCAGGCATTAGCCTCCGCCGTTACCAAGGAAATACTTCCGTCTTCAGCTCAAGAAGCTTGGAGTGACACAGGAAAACACTTCAAACGGATTTGCGACATTCTGGCGGTCGAAAGCGACTGGGAACTACTTATGAAGTGTGTCGATGCCTTGTTCTCGCGCGTTTTTGGGACACTGAAATGTCTTGACGTGTGGCCCATTGGCGAAAGCATTCTCATTTATCTTGGTCTACTGAAAAGTGAATTCCATATTGAAACTGTAAGGAATCTTAGCTGTGCTTTAAAAGCACTACATCATGCAGTGAAGCAGAGCTATTTTCCACCTCTTCTAAAACAATTGCTTGGCTGTTTCCTACGAAAACCGAATCCAGCTCTTACGCCACATTCCACAGAAGTCGGCGAGATATTATCTACAATGACCCTTGAAAGCTAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009525 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF07834 all species →	RanGAP1_C	RanGAP1 C-terminal domain	Domain	Interproscan
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR036720 all species →	Homologous_superfamily	Ran-GTPase activating protein 1, C-terminal domain superfamily	Interproscan
IPR009109 all species →	Domain	Ran-GTPase activating protein 1, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24178 all species →	MOLTING PROTEIN MLT-4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0097543 all species →	Cellular Component	ciliary inversin compartment	Interproscan
GO:1904108 all species →	Biological Process	protein localization to ciliary inversin compartment	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000037329.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.