Detailed information of ENSOJPP00000001017.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031571333.1, chromodomain-helicase-DNA-binding protein 4-like [Actinia tenebrosa]
Species abbreviation AXANT · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q12873Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens OX=9606 GN=CHD3 PE=1 SV=3
Q8TDI0Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens OX=9606 GN=CHD5 PE=1 SV=1
D3ZD32Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001712 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00385
all species →
ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan
PF00628
all species →
PHDPHD-fingerDomainInterproscan
PF08074
all species →
CHDCT2CHDCT2 (NUC038) domainDomainInterproscan
PF00176
all species →
SNF2-rel_domSNF2-related domainDomainInterproscan
PF08073
all species →
CHDNTCHDNT (NUC034) domainDomainInterproscan
PF06465
all species →
DUF1087CHD subfamily II, DUF1087DomainInterproscan
PF06461
all species →
CHDII_SANT-likeCHD subfamily II, SANT-like domainDomainInterproscan
PF00271
all species →
Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000953
all species →
DomainChromo/chromo shadow domainInterproscan
IPR023780
all species →
DomainChromo domainInterproscan
IPR019787
all species →
DomainZinc finger, PHD-fingerInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR012957
all species →
DomainCHD, C-terminal 2Interproscan
IPR001965
all species →
DomainZinc finger, PHD-typeInterproscan
IPR000330
all species →
DomainSNF2, N-terminalInterproscan
IPR001650
all species →
DomainHelicase, C-terminal domain-likeInterproscan
IPR016197
all species →
Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR012958
all species →
DomainCHD, N-terminalInterproscan
IPR002464
all species →
Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR049730
all species →
DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR009462
all species →
DomainCHD subfamily II, SANT-like domainInterproscan
IPR009463
all species →
DomainDomain of unknown function DUF1087Interproscan
IPR014001
all species →
DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR038718
all species →
Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45623
all species →
CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0140658
all species →
Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0000785
all species →
Cellular ComponentchromatinInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0003682
all species →
Molecular Functionchromatin bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006338
all species →
Biological Processchromatin remodelingInterproscan
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0042393
all species →
Molecular Functionhistone bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOJPP00000001017.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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