Gene detail

Detailed information of ENSOJPP00000001307.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031549320.1, methionine adenosyltransferase 2 subunit beta-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

Transcript

ENSOJPT00000001658

ccccctcccccctcccccagaaACTTATGCCTTTGGTTTTGATGCGCaaaatattcttcttcttctggaGTGAGACCCAAATCAAAATCCTAGTTCTTgcaagaaataagaatatacctCCAAAGgtagcccacagccactggtagaatcagtgttaaaaataaaatctatcatgcgtaaatggTTGAAGTCCAAGTCTGAATATATTATCTGCTGCTAAGTTCCTAGCAACGTAAGCAGTCGAGGAATATACcgaattgggcttcctgtgttgttTTACTTGGATAATTCGAACAAACATGGCGGATCCATTTCGAGTCTTGATCACAGGAGCTTCAGGTCTCCTGGGAAGAGCTTTAATGAACGAATTCTCATGCTCTCCTACTTTTAAAGTCCTCGGGCTTGCACATAGTCGAATATCTGGAAATTTAAAGAAGGTTGACTTGCTAAATTTTGAGGAAACAAGACAAGTAGTGGAGGATTTTAAACCCCACTTCCTCATCCACTCGGCTGCTGAACGTAGACCAGACGTAGTGGAAAAAGACGAACTTTCTACACAGAAGCTCAATATAGAAACGACAGAATTCTTAGCAAAACTGGTGGAAGGTTTCAACAAGGGTCTTGAAAGACCGAAGCACTTTTTACTGTACATAAGTACCGACTATGTATTCGATGGCTCTAACGCTCCATACAAACCAGGCGATCGACCGAATCCACTCAACAAGTATGGAAAGAGTAAACTAGAAGGAGAAGAAGCAGTCAAACAGTATCATCCAAACGGGCTTATTCTGAGAATACCTATGCTTTATGGTGATGTGGAATACCTTGGAGAAAGTGCCGTTACAGTTCTTTTGAGCATTATAAAAGACCAAGAAAAACCCACAGTTATGGATGACTATCAACCTCGCTACCCAACCCTTGTGGATGATGTAGCCAAAGTTTGCCACTTTATtgccgaaaaaaaattaaaagagcCATCTTTATGTGGAATCCTTCATTGGGGTGGGCAAGAGCAAATGACCAAGTACCGTATGATCTGCATGATGGCCCAACTGTTTGGTCTTCCAATGGACCACAttaaaccaaacaaaaacccACCAACAGGCCCCACAAAACGGCCGTACAACACAGCCCTGGACAGTGAAAAGCTGGAAGACATGATGAGTGACAGAAAGTCAAGCTGTAGGACAAGTTTTGAAGAaggaatacaaaaatatttgaaaaaacatcTATAAACACCCAATGGAGCAGTGGCAGATCCAAAATGATTTCAAGGGGGTGGCTGTTACCCAGTAAGGCATCACATAGCATCATccttattattatcatgattattaCTTTCAACTCCAAAGAGGTTTCTTAGCTACCCAATccaccacccccccccctggaTCAGCCCTTGTTGGAGAACTCTCATGCTCTTGAAGTTTAAGAACGTAATTTCACAGTAGTTTAAGAATGATATTCTATTTCAATTATCAAAAGTATAAGAAGTCATGCTCGTGAAAGTAGCTCTGGAttgttgggattcctgtgaAAGTAgaagttgggcttcctgtgttaatGAATATTTCTACAAAATCAGTCTATCCACCACTTTTACATccccaaaatgctttttttttgggggggggggggggggggcaacaGTAAGGAAAATTTagattcaaaaattcaaaacttttcatgcaGATGCTGAGTACATTAattttgctattatcattaaaaaattcagTATTAGTtaaatcagagttaattccatgcgcatgggagaatgaaaagtttggtgttacagacattACAGACAATATATGGACTTGCTATGAAATGCAGGGTGTCGAGTGGTAGgcgagcaaaaaaaaataggaaaatctGAATGGGAAAAATagggaaaaaaaaggaaaacatgttcataaataggaaaaaataggGTCTCCAATAGCAGTTTCAATGGCAAAGACAGCCTCCTAATGACTATAACATCAAACAAATGTTAATTTGGTTATTAGTTTTGTGACACAAGACTCTTTAATACATTTGctaatatgaataaatacaTGAATAGTTTTACTTCAGCTGCAACTACATATATTTCATAGACATCTtttggattttcaaaatttagagAATATACATGCCGACTAACAGACCGTagaacacacacacaaacaaaaatatatgaagCATTACTtgaatatactttttttttctgactTTTAAAGTGCTACTCTGAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q566L8	Methionine adenosyltransferase 2 subunit beta OS=Xenopus tropicalis OX=8364 GN=mat2b PE=2 SV=1
Q4QQZ4	Methionine adenosyltransferase 2 subunit beta OS=Xenopus laevis OX=8355 GN=mat2b PE=2 SV=1
Q99LB6	Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007721 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04321 all species →	RmlD_sub_bind	RmlD substrate binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR029903 all species →	Domain	RmlD-like substrate binding domain	Interproscan
IPR005913 all species →	Family	dTDP-4-dehydrorhamnose reductase family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10491 all species →	DTDP-4-DEHYDRORHAMNOSE REDUCTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006556 all species →	Biological Process	S-adenosylmethionine biosynthetic process	Interproscan
GO:0048269 all species →	Cellular Component	methionine adenosyltransferase complex	Interproscan
GO:0048270 all species →	Molecular Function	methionine adenosyltransferase regulator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00789	metK, MAT; S-adenosylmethionine synthetase	EC:2.5.1.6	Biosynthesis of various plant secondary metabolites	ko00999	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.