Gene detail

Detailed information of ENSOJPP00000001512.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031552415.1, CST complex subunit STN1-like [Actinia tenebrosa]
Species abbreviation AXANT · all data for this species · gene families

Sequence

CDS

Transcript

ENSOJPT00000001943

tgtggttttGCTTCTATCATGGCGACAGACGTGGATTTGCACGTTCATTACTGGGGACTCAACTCGACGTTTTGGGCCCACAGAAAGGTTTTTGTTAAGGAAATATATGCATTGATGGAAAGCAAGGAGTACAAAGgTATTTACCAAACTGGAAATCAAGTTGTAATAAGAGTGGAGGTATTAGGAACTATTGTTTCTGTGGATGATAGAGAAAAACTTACTATCTATGGAGTAGATGATGGCACAGGAATAATATCATGTTGTTACTGGAAGGAAAACATGTCAACAATAGACCCGTATTGCCTTGGTCAATTAGTGACTGTCCAAGGAAAACTAACTACATTCCGTGATCAGCGACAACTGGCAGTCAGCTCCGTAGTTTTAGAGGGTAACCCCAATGCTGAGATGCTGTTTTGGCTTGATGTTGtcaaattaaacaaagaagtCTACAGCACTTTATTTGTGCTTCCTGATATGGCTAGTGATGATAGCTCCTCTTCATGTACAGAACAATTAATGCAGTTCTTGTCAAAAGACACACaggagttaaaaaaaaatggattttcaTTTAGAGATTTGTGCTCTAAGCCAAGGGTGCAGGAAATAGCTCGGGCTAGTTtgggttcaaatttgaatgatCAGATAATAGATAAGAATAGATGCTCTTCTGAGATTTGCAAAGCAGTACGAACGATGCTGAGACAGTTGGAAATGAAAGGAGAAATATACTACAAAGATGCAGCAATGGATTCCTATGAGATAATCACATATGATCACTTGAAGCCTGCCATTATAAAAGCTATCAAGGACATTAGTAAAGGGTCGCTACATCAAGGTGCTCACATTGCAAGGATTACAGATACTTTACACTCCACTCAGAGTCTTTGTCGTGTTGGTTCTGACAAAGTTCTAGATTCTCTCAAGAAACTTATTGGTGAGAGTGAGATTTACCAACCAAGTAATCAGGTCTACTGTATAGTGTAAGGATGGTGCACCATtacagggggaggggagggtacaGTGAGATTCACCAACCAAGTAATCAGGTCTACTGTATAGTGTGAGGATGGTGCACCATTACAGGGGGAGGAGAGGGGACACCTCTGCATTATGTGCCACATAGAGCGGTTATTgtacgagtgggaaacatagGGTACCTACTGACTTgcagccagctgatctgaaatagtgacatagaaatgacgtcacagcaaaACTGAGTTGTCATGGAGCCTGGGAAGATTGACtcataaaagtttatattttaatcGAGATGAATTTAGATTTTCAGGTTTTTCacattattttgtatacttttactatgatattcttcattgaatgggaaaataaaataaagaaataaccatttcACAAGTCGCCAGGCTACTAAGGATAACAcatcagttttgcaaattttctcgattctgattggctaacatctttttctcagatcagctagAGCATGAGCAcagtacaacatgccgtaacattgaaatggcttcccctTCTCTTCcaataattcatccaatcacaaaccaTAGCTTCGGATACGGTAAGATACAGCACAGTTACATATATCCTGTATcgttttccactcatacgaaaaccactctatgcATTGTGCAGCagcaaaacaacaagaaagattgtgcaataaaaatgtaagttttattaatattttatttattaaatacaTGGAATTTGAttagtttcttattttcaataCAACTTCCCTAATAGAAGGTAGTTTGTTCTAAAGTCTTGGTAAGGTTCTCGGGTAAACGTATAAGAATGTTTCTATCTAGACATTTGGGTTTTGGCATttgttaatcaaaatattactGGTTCAGATAACTGTAAATtcgattgatggaagccaaaacatgAGAAAATGTCTGTGATGTATActacatgaaacacaaaaaacACTCTAAAACCTGCGTGGAGGCAGTCAATCTTGAGTGTCCTCCCACTAACTCACCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K2X3	CST complex subunit STN1 OS=Mus musculus OX=10090 GN=Stn1 PE=1 SV=2
Q6AYD2	CST complex subunit STN1 OS=Rattus norvegicus OX=10116 GN=Stn1 PE=2 SV=1
Q9LMK5	CST complex subunit STN1 OS=Arabidopsis thaliana OX=3702 GN=STN1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007414 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01336 all species →	tRNA_anti-codon	OB-fold nucleic acid binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR040260 all species →	Family	Replication factor A protein-like	Interproscan
IPR004365 all species →	Domain	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13989 all species →	REPLICATION PROTEIN A-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23312	STN1; CST complex subunit STN1	-	DNA replication proteins	ko03032	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.