Gene detail

Detailed information of ENSOJPP00000004362.1 in Anthopleura xanthogrammica

Genomic Location: :...
NR annotation: XP_031556784.1, uncharacterized protein LOC116293490 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSOJPT00000005175

atggcggctggtATGCAACTTCCTCCTTTTCGCTCACTACAAGACGTCTTAACGGACGCACAATTTACTATTCCAACTTTGAACGACCCAGAAAGAATGTCTAACAGGATGATTAATAATCTTTTGTACTATCAGACGAATTATTTCTTGTGGTCCATCATTATTTTCCTCGTTGTAGGaacACTATATCCCAAGGATATGATAATAGGAGCAGTATCTGTAGTAGTAGCTCTTGTGATATACGCCAAGATatgtaaagaaaaagagaTCAGCCAGAATGAAAATAACGCCTATCATTACCTTGTTACTGCTGGTGTCGCTGGTATTGTTCTCTTGCTAATATACATGCTTGGGTCTGTGCTCGTCTTTCTTTGGGGTGTGGTCGCACCTATTACTGtgattTGCTTGCATGCTTCCTgcagaaaaagaaatcttCGAAACAAATTCACAAATGTTGCAGACATATTTCGAGAAAACCCCAGTCCAATGACAATTATCCTTTCAAGACTAACGACAATGTCAGCTTTGACTGAGACGCCAACAACATTGAATAATCTTCTTCATGACATTGGAAAGGACCTGAATTTGGAAGACGTACGATACATGAAATATCTTCTCCAAGGCCATATCAACAAGGAAACACTACAGCATCTAGAGTCAGGGGCTGAGTTGACTGAAGTCTTAAAAACTCGAGGCCTTGTATCCGAAAAACGACTAGCTTTTCTAAGAAAGCTTCTTGTTGAAACGAAGTGCTTAAAACTGGTGAATTTGTTGGACAATTTCAAGGAAAAGTATACTCCTGGCGTTAGTTTTGGAGATCGTGATGAACAAGATGGGAATGCAAGACGAAATACAAAAAGAGAAACGATGCTCCGTATGATAGAACGACTAGAAAACGAAATAGTCGCTAATGAAGAATGTGAAGCTGAGTTAAACAACGATGTCAAGCAATACGAGATGCAAATACAAGCGAATAACGAAAAACTGgtccaagaagaagaagaaatacaaaaactcaaagagaaaatcaaggaaaatgAAGCCAGTATTGAGTCGTTTGAACGAAAACTTGAAACTGTGCGTTTTTTCCTCAAGAAACAAGAGGTAGAACTTGACAAGTTAAAACAGAAGCTAGAGAAGAACAAAAACAGTGCGAGCATTAAAACAgagttaaaagaaaaagatactGAGCTCGAAAAAGGTAAAAAGGATGAAGATGAGTTGATCTCGAAGCATCAGAAAGCGCTTGATGATATTCGTTCTATCCATGTTGATATACGGCATCGAACAGAAGGGATAATACGTTTAGAAGACTCAATCCACGATACACTATTACAGATTCGTATTATCAAACATAATATCCACAAGAACCAGCGTATGAGGATGGAATTGCAGGAAAAACTTGATAATACGTCCATTGACTTGGAAGAAACCAATCGTCACAAACCTTTAACACCAGCTTCACGTGCTCAAAGCCGGTTTAAGTCATATTCAAGAGCTGAAACTCAAAATGTTGAACAGAGTGTTGAATACAAGATTTTGGACTACAGCGAAATGACAGAACAGGAATCAACAGTAATTGGTCGTAAGGGGAAGGGAATATCGCCACCACAGTTTAATCTACCAGTCAGTGTTGCTATTAACCACTCAGGTCACCTTCACGTTGCTGATTATGGAAACGGTCGAATCCACGTGATAACAACGGAAGGAAAAGTCCAGAAGCAACCGCTCAATATTGGCGGGAAATGCCGACCATGCGCACTGGCTGTCAGCTGTCGAGGCGACCTCGTAATGACAGATTCACAGATTATTAGAGTCTTTAATAAAAATGGAGAGTTTCTTCGGCCTATCTTACCAGTGTACAGCAAGAATGACCGCAGACCAGAGCTGTGTTCCATAGCATTCGACAACAATTGCTGCATATACACTGGCGACAAAGCCAACCACAGAATCCAAAAATTCAACTTCGAAGGCAATTTCCTTCATTTTATTGGTGGACCAGAAGAAATCAATTACCCAATAGGAATAGCTGTTACAAAACATGGTGACGTCATAGTTTCTGACTACATGAAGCATCATTTACGAGTGTTTTTCCGTGAGAGAACTCTGGAAAGCAAGACAATTGGTTCCAAAGGGATTGGTGTGTGTAAATTCGCATATCCAAGAGGGATAGCTTTGGATCACCAAGAGAATATCCTTGTAGCAGATAGTCAGAATCATCGCATTCAGGTAGTGACTATCGAAGGAGAATGCCTGGGTAGTTTTGGCACCGTTGGTGATGATCTTGGTTCGTTTAATACTCCATATGATGTAGCGGTGGATAAACATAGTAATATCATCGTTGCAGACACTAAAAATCATCGCTTGCAGGTCTTTTCGAGACTTGTCCCGGTTTACTCTATTTATGATAGtaatggaaatgaaaacatGAATGGTCACTCTGATGAAAGAGATGAGAAGGAAAATACGAATGGTCACTCTGATAGAAGAGATAATGagattgaaaatataaatggaAACTTTGGACATGAGGAAGAGAGGGAAAGTGGAAGGGTAAACGGTGtcgaaaatgaagaaaagattGACGACAACCAAGATGTAGAAACGAATCAAGGACGTTTACCAGATGGGGAGGTTCACGAAAGAGAAGCTTCGATTTCAAATGAAGACGGTAAAGTTACAAGTTCCTctaatgagaaagaaaatgatagggcgaaagaaggacaagaaacgaATAATGAGGAATTACGAAATGAAGGAAAttctggaaaaaaagataGCGATGAACGAATGGACATAAACACACAACAAAAGACTCCAACAAATGAGGAATCTGCTGAACAAAAAGACAATTCTGCAAATAGCGAGACAAATGGGGATCTAGTTGTTGAGCCAaatgaggaaaagaaagaagacacCTTAGCAGATGTTCTACAGCAACAATCTAGTCCTGATAAAAGCCAAAATATATCTTAG

Transcript

ENSOJPT00000005175

Protein

Uniprot

Uniprot term	Description
Q9JIG8	PRA1 family protein 2 OS=Mus musculus OX=10090 GN=Praf2 PE=1 SV=1
Q5F433	PRA1 family protein 3 OS=Gallus gallus OX=9031 GN=ARL6IP5 PE=2 SV=1
O60831	PRA1 family protein 2 OS=Homo sapiens OX=9606 GN=PRAF2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01335	DED	Death effector domain	Domain	Interproscan
PF01436	NHL	NHL repeat	Repeat	Interproscan
PF03208	PRA1	PRA1 family protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001258	Repeat	NHL repeat	Interproscan
IPR001875	Domain	Death effector domain	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR050952	Family	Tripartite Motif and NHL Repeat Containing E3 Ligases	Interproscan
IPR004895	Family	Prenylated rab acceptor PRA1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24104	E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan