Gene detail

Detailed information of ENSOJPP00000005014.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031553424.1, 77 kDa echinoderm microtubule-associated protein-like [Actinia tenebrosa]
Species abbreviation AXANT · all data for this species · gene families

Sequence

CDS

ENSOJPT00000005834

ATGGCGTATCGTGGAAAAAGGAATTTTACTCGGCGTAGAGGTGTTCCTGAGGATCGAAAAGTTGACCATGATTACAGTTCGTATGTGAGTGAAGGTGATCAGGACCAAAGTGATGAAGAGCAAAAATACGAcgaaaacgatcaaaaatCTCTGCCGAAGATTaacaaggaaaaagaaacacGAAAAACAACGGAGCAACCTAGATATATCCCTTCAAATGACAGTAGAATTCCAGTTGCAAGACGAGGAGTGAATAATAAACGTGTGCCAAACTCCAGGAGAGAAGAACCAGTGACACCAGTTCGCGAGCGATTTAGAGCACGccaccacgacgagcaagaTTCCTCCACCACAAATGAGGACCAACGAAGCGAATTGAATAAAAACAGGACAAATAATATGTCAAAAAGAGTAACTTTTTATCGTAATGGAGATAAACATTTCAAAGGACGGCCATTTATCATCACTAAGCAACGATACCGTTCGTTTGAAAGCCTGTTAGAAGATTTATCAAGGGCAATTCCTCTACCTTACGGAGTgaggaatattttttctcctgACGGAcaaataattaattctattAATGAGCTTGAAGATGGTGGCTACTACGTTTGCTCCTCTGGGGACCAATTAATCAGAAATATAAACTATAATGccgaaaaaagaaaggaaaaaaataatgatattccTAGCGAAgggattaaaaatattaaactttCTGTTCCTCCGGACAGCTCATCGAATCCAAGTTCTCCAAGAACAAATAGTACGACTCCGAAACCTAGAATTATCACGATtatgaataaagaaagaaatctgAAATGcaagattttattgaataGAAAAACAGTCAAAAGTTACGAGGATGTCTTACGAGATGTGTCAGAAATGATGAAGTTACATGGAGAACATGTGAAAGAGCTTTATTCATCACAAAAAAGGGCAAAAATTGGTGGCTTGTCAGAGATGTTTCACGGAGATGATGACGTCTACACAGCTATCATCGTACAAGATGGCAACACCAAGCGGAACTTATCCAACCCATCCTCCCACAGTAGCAATGGCGGTGGACACTCACCTGGCTCAAgtggaagaaaacaaaaatcaagaaagaagCAGAAAAGAGATCTCGATGGTCATGAACGAGGAGTCACCATTAAAGTCAAAGACAAGAAGCTAACGTTTTACCCTCCATCGAAGAGAGACGCCATATTGAGTGATACTGAGGAAATATTCTCAGCCCCTGGTGCACGTCCGCAACTTAATTGGGTGTATGGGTATCAAGGTAAAGATACACGATACAATCTACACGTGCTTCCATCAGGCGAACTACTGTACTTTGTGTCAAGAGTGGTTGTCATCTACAACAGAAAGAATAACACACAAAGACACTACACTGAACATGCTGATGATATCAAATGtATAGCAGTTCATCCCAATCAATGGTACATCGCCACTGGTCAAACATCAGGACTCTCTCTCGATCAAAACGACCTCAGTCATGTACGTATATGGGACAGCGAGACTCTCTTGACCCTCACAGTGTTACAGTTTGATGACTACAGCCTTATCGTGATAGCCATGGCATTCTCAGTCGAGGACAATGGCGACATATTATCATGTATTGACAGCAGTGGAGACAGTTATCGACTCAGTCTTTGGGAATGGAAAGACAAGAAGTGTTTGGCGCAGAGCAAAGAGTTTACAAGCATCGCGCTGGCCGTCATGTTTGATCCAGATGACAATAAAACAATCGTGTCATGCGGCAAGGAACATATCTACTTCTGGAGATGGCACAATGGAaaactggaaagaaaaaatggctTTTTCGAGAACAATCCACTTCCACTTTATGTAACGTGTCTGGACTTTGCGCCCAATGGGGATCTATTCACAGGAGATTCTAATGGATCCATCACATCCTGGAGCAAGGCTGGTGGAAAGGATGGGCGGGTGTGTGCATGGGACGCCAACAAGTTCTTCAACCTGCCTCTAAGAGAAATACAGGTTGGTTTGATGCGACCATTCTGTCAATTACTCGGGCTCCCGGAAGTGACCATTCCATCATTTATTGCTCTTCAGCCGCTACAAACTGGCGAGACTGACGTCACTCTACTGGCAGGAACAACAGCCAATAGTGTCCTAGAAGGTTCATTTACTAAGCCGTTTACTACTATCGTCAAGGGTAACAAATTGGATGTGCTATCGTTCGCTGTTCACCCCTCAAGGGATCTTTTTGTCACTGCATCTTTAGACAAGACTGCGACATTATGGTCAGCGGTTAATCACGAGACTATCTGGAGAGTTGATGTTGAGTTTCCTCTCAGAGTTGCAGCGTTCTATCCCACTGGTAGTGTGATAACATTTGGTACAACACAAGGAAGATGGATCGTATTGAATGCCGAGTCAGGGATGCACCAGGCTTCATTCCAAGATGGCagcgaaccaatcacagaCCTCGAATATTCTCCAGATGGTGAACATATTGCTGTAGGATCAAAGGATGGTAACATTTATGTCCACGCTGTTTACGATGATGGGATGACGTACAGAAGAGTAGGTTGTTGTTCGAACCACACCGCTTCTGTTATGTTTCTTGATTGGTCGGTGGATGGTTGTTTCATACAGAGCATGTCGACCGAGTATGACATCATCACATgggaGATCGGAGcatttgaaaaagaagaatcaCAGAATATCATCCGGGACACAGAATGGAACACTCGAAACGTAGTACTGGGATATGACGTAGTAGGTGTCTGGCAGTCAACACCAACAGATGGGAACCTGGTGACTAGTTCTGATCTGGCCTGGTCGCATAATTTGTTAGCTATTGGAGACGAACTGGGATACATGCGGATCTTCCGATACCCGTGTAGCTATGAAGGGGTTAAATACCATCAAGTGCGCGCGCATAGTTCCACCGTCCTACGTGTAATGTTCCTCTCATCCGATACATTCCTACTAAGCACCGCTGGTCAAGATTGCGCGGTCCTGCAATGGAGCATGGAAGGAATGATTGATCCGCTGACCATGAAAACCAAGAAGCCTAAATCTGAGAATTTAAAAGTCGTGATTTCAAATTCTGACGGCCAATCAGATATCGACGAAGGAGAAGACTATTCATCGAAAGAAGAGAGCGAAAGGTCTCGAAATGAGTTGGCGGATGCGTTCGATGATGACCACGAAGATGAGCGAACGGGCAGGAATCGTAAAAGTCGTCACCAAAGAATCGATAAAGACTTCAACAACAGCGAAAGAAGTACTAAAACTAAGGCAGAATCTAATTCAATTAGCGGACGAAATAAAAAGCCAGACTCTGAGGTCTCAGATGAAGCACAAGAACGAACAAGCGAAGAATATTCTTCTGAGGATTATAAACGACAACACGAGGACCGAAGACCACTAGGGAAGGAAGTGAAAAATCTTCGTGGAAGACGAGGGCGTCCGTCTAACAAGCGACATTCTTTTGAAGAGGATATGTACCAAGATCGAGATGACACAAGCGACGAAAGGAAAGATAGAATACTACGAGGCCGAGGGAGAGCTAAGAGATACGCAGAAGATGATGTGTCGATGGAGGAGGAAAGCGATGATGATGTTTCTCCAAGAAGAACaataaaaccaaaacaaaatggctacCGAAGAGCAAGATCACCGAAGGACAGAGATGGAAGGAGGCGTGATAGAGATGTTGGTCATAGTTATAGTGAGGAGTACTCAGATACGATGAGGGATGATAGAAATAGTTATAGGAATAATAGGTATGGAGGAAgaagaaattataaaaataatggagaaccCGGTTATAACAGAAAACATAGATAG

Transcript

ENSOJPT00000005834

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O00423	Echinoderm microtubule-associated protein-like 1 OS=Homo sapiens OX=9606 GN=EML1 PE=1 SV=3
Q4V8C3	Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2
Q05BC3	Echinoderm microtubule-associated protein-like 1 OS=Mus musculus OX=10090 GN=Eml1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001441 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF03607 all species →	DCX	Doublecortin	Family	Interproscan
PF03451 all species →	HELP	HELP motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR036572 all species →	Homologous_superfamily	Doublecortin domain superfamily	Interproscan
IPR003533 all species →	Domain	Doublecortin domain	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR050630 all species →	Family	WD repeat Echinoderm Microtubule-associated Protein-like	Interproscan
IPR005108 all species →	Conserved_site	HELP motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13720 all species →	WD-40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0072686 all species →	Cellular Component	mitotic spindle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18595	EML1_2; echinoderm microtubule-associated protein-like 1/2	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.