Gene detail

Detailed information of ENSOJPP00000007816.1 in Anthopleura xanthogrammica

Genomic Location: :...
NR annotation: XP_031566970.1, class E basic helix-loop-helix protein 40-like isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSOJPT00000008982

GTCAGAGTAGTAAAGAAAACACGAACTGCCGAAGTTTAATAGTTTTAATGGCACTAAGGGTGAAAAAAGTGAAGCCACCGGTAAAGACTAACTGGCAAGACTTGAATCAACATGATATAAGAATGAGGCTCAAGGCGACCCAGAATTTCAGTAATGAGCTTGTTGATGATTGTGTAGCGGGAAGAGGGACAcaaactttggacaacaagaCCAACAACGACATTGATATCGAAACAACATCACCATGGAAGTATCCTTCCTTCAACTCCAAGAAAAAAGGAACTTCGGAATGTTCTCATAAAGTCATCGAAAAACGAAGACGAGATCGTATCAATAAATGTTTGGGGGATTTGGGCCAAATTGTCCCTACAGCCCAGAACGGAAAACAGGGATCTGGAAAGCTAGAGAAGGCAGAAATCCTAGAACTAACAGTAGAATATCTGAAAAACTTACAAGTTGCTGCAAATAATACCGAAAATGGAGCAACCAGCGGAAATGTAGAAGCCCAAAAAACACCAGAAAAAGaacaaACTTCATGTACCAGTAGAGAGCTTCAAGCCTATTCTAAAGGCTACAGTGATTGCACATCTGAAGTGTTACGATTCCTAGTCACGGTAGAGGCAACAGATCCCAGACTTCCCTGCTTTCAACGGTTGATGGCTCACTTGCGGATTCAGTGCCGACACTTAATCGATCTTCCTGACCATGacaacaagcaaaaaaacaaacagaataCAGTTACAACCTCAAGCACTACCAAAACCAACCAAATTGGCAAGAAAAATAACTTCAAAGCTGAAACACAGAGTGATGGGCCTTCTGGAAAAAGACAAAGGATGGAAGTAGACAGCTCTGTTAATTCCAGTACAACTGGCAATGGAAATGAGAAATCCAAGAATCTCACAGTTATGGGATTTCTTGAAGAAACTGGCAACAACACGTACAACAAGGGACATAGGAGTGTTGGAAGCAGCAGTATGAGTTCTTCAAACGGTAACAGTAATACTGATAGCCTGAATGGGAATAACTCAGGGAACAACAATGATATGAACGGTAACGGCAACAATTATCCAGCCCAGTATTCAAACAACAACTCCATGCCATTCCCTAATCATTTCTATCCTCCTTCGTATGGTTTCCCAACCTATGCGCTTCATCCAGCTGGTACCCATTATATTCCTGTCGCACTTCACCCAGGAATCCAAATGCCAGGTAACAACATGCatgggatgaatgggatgagTGGGATGAATGGAATGAGTGGGATGAGTGGGATGAATGGAATGATGCCTGCTGCAACACTGATTAACCCAGGACTTGGCTTCTACGGTTCTTCAATGTCTGGACTTCCTCCTCACTCTTCACCAATGGGTTCTGGCGCATCACCTGCATATGGACCATTGGGTGGTGGCTTCGGCTTGGGGTTAGGTCTTGGAGGGATGGGTGCAGGTCTTGGAGGAATGGGGTTAGGGCTAGGTGGATTGTCATCTGGTCTAGCAGGCCCTGGAGGATTACCAGTATACCTGTCAATGGCACAGAAAGAACAGAATCGGAACAGAAGTCAAGATTCTAATGGAAGCAGTGAAAATGAGTCCAATACCAGCAGTGATGAATATAACTTTTCATCTAATTCTTCAGGGAATATCTCTGAAGTTGGTATCCAAACAGAACAAACACAAGACCATTCTGACTATTTCAGTGCTGGTAGTAGATAGTTCTAACCACACAAGTAACTTCCTCTGGAAATATCTTGAACTATTACCACAGAGTAGAGACCATTCTGGCTATACCAGCTGTGTGGGTAGCAGATAGACCAAGCAAAATTTATTACAAACATGAATATggtatctctctctctctctctctctctgatGAAGTCTTTCATGGAACTTTCAGAACTACGTCGAACATTACTGAGCCACCTAGTAGAGACTTGTATATACAGTAACTTCCAAGACAAGGCAGGGCCTAATAATGTGTGatttcagaaaatatccaCACCCCACCGTGGAGGGAACTGGAAATTCCAAGGGGTTGAGGGGtcagaggaaaaacaaaattacaaggttggtatggaagaaaattggaaattcacAGAGGGGTGGGGgatcattttttcaaattccctCCATGgtgggtatggatattttctggaaccacATGATTTATATTTAAAGACATTCATAGTAGATAATATAATGCTTTGCATGGAGCGTTTCTAGTGCAAGTCATATGTGCCTTGTTCTGTGTTGACCTGCACACTAACACTTGTTAATGGTCCGTAATTTGTGACAATAGACAATATCGATAGTCTGCCGCAGCAATGCATTTTGAGACAAGTAATCAATTGAACTataacaccaaaaaaaaaagaacaacaaaccaTCACATCTTTTGTTTCAGTATGAGTATTATTCCACTATGTATCAACTGTCAGTTGAACAGTGGGGACTATGATGAACCAAAGTTCTGTCTTAAAAGTCCATTGAAGGCTTGTTTGtcttttgtgaatttttttagcCTGTTCTTTGTCAACATTAAGAAGTTGACTCATCTTGATCCACAGATCTCTGACATGTTTAGCTGTTGGGTTTATGAACAACAGTTGTTTTGTTAGATTGAAATTAGGTCGTCTACATATTACATAATCTATAgtttggtgttatttgatcgagttaacagtcccagaatgcattccTGCGGCAAACTAGTCT

Protein

Uniprot

Gene family

Uniprot term	Description
Q7TS99	Hairy and enhancer of split-related protein HELT OS=Mus musculus OX=10090 GN=Helt PE=1 SV=1
A6NFD8	Hairy and enhancer of split-related protein HELT OS=Homo sapiens OX=9606 GN=HELT PE=2 SV=2
Q6QB00	Hairy and enhancer of split-related protein helt OS=Danio rerio OX=7955 GN=helt PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	bHLH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07527	Hairy_orange	Hairy Orange	Domain	Interproscan
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR003650	Domain	Orange domain	Interproscan
IPR050370	Family	Hairy and Enhancer of Split/HEY-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10985	BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0009952	Biological Process	anterior/posterior pattern specification	Interproscan
GO:0050767	Biological Process	regulation of neurogenesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12126	PIF3; phytochrome-interacting factor 3	-	Transcription factors	ko03000	deepkoala