Gene detail

Detailed information of ENSOJPP00000011503.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031551578.1, hydroxymethylglutaryl-CoA synthase 1-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

Transcript

ENSOJPT00000013214

GGTCGGCAGTTTGTAGCAGTTGAGCTCATTTTAGAATCGGAATTCtctaggaaaaaaaatgtctaaCGGCATATTTGAAGCCCCTAAACACTGGCCAGAAGATGTGGGAATCTTAGCAATAGAATTTTACTTCCCTAAAACTTACGTTAGTCAAGAAAAATTGGAAGAATTTGATGGTGTTAGTAAGGGAAAATATACCATCGGCCTTGGTCAGAACCACATGGGATTTTGTGGAGATCGCGAAGACACCAATTCCTTAGCTCTGACTGTAGTTCAGAATCTCTTTGAGCGGAATTCCATAGATCCTAAAGATGTAGGGAGACTTGAAGTTGGGACTGAGACTTTGATTGATAAATCGAAGTCGGTGAAGACAGTTTTGATGCAGCTGTTTGAGGAATCAGGGAATAGTGAAGTGGAAGGGATTGATACCACCAACGCTTGCTATGGAGGAACTCAAGCTCTTTTTAATGCTTTAGCTTGGATTGAAAGCAGTGCTTGGGACGGTCTGAGAAGTGttcacatgcaacatgcaTATGATTTTTACAAACCCAACATGTCCTCAGAGTATCCAGTAGTTGATGGCAAGTTGTCTGTCAAATGCTACTTCAGAGCTGTTGATCATTGCTaccaaaaatacaaagaaaagttggccaagaaagaaagcaaagatAGAGtcaatattaatgatatggatTACATAGCTTTTCATACACCCTTTTGTAAGATTGTTCAGAAGTGTGTGGCGAGGATGGTCTTGGCCGATTTCCTGGCAGAGCAAGAACCAGGTGTGGATGCTAATAGCTGCTATCAAGATTTATCAAAATACAGACGTCTTAGTCTTAGTGAAACATTAGACCAAGAGACACTGGCCAAAGAGATAGAGCGTGCTTCTGTTAAGGTCAGTCAGAAAGTATTTGAAGCCAAAGCTTTACCATCTACCAATATAGCAAGAGAGGTTGGGAATATGTACACACCATCATTGTATTCTGGTCTTGTCTCTTTGCTTTACAGTATTCCTGCTTCTGAATTAGCTGGGAAACGTATTGGTATGTATTCTTACGGATCAGGCTTAGCTTCTGCAATGTTTTCGTTACGAGTCGCCAAAGATGTCAGTCCAAGTTCAACTCTTCGCCGCCTTCTTGCTTCGGTAGAAGATGTCCCGTCACGCCTCGCTTCAAGGTGCGAAGTCTTACCAGAGGATTTCGTAAAGACTTTGGAAATTCGAGAAAAGGCGTATCATGCTAGCAGTTATACACCTGTGGACTCGTTACAAAGTCTTTTCCCAGGAAGTTTCTACCTGGAAAATATCGATAAAATGTTCCGGAGAACATATTCGAGGAAATCAAAGGTCGAATCATCGGAGTAATTTCGTCTTCAAAACGGGTTAGGAGTTCCTGTTATCGGACGGAGATCGTCGGTATTCGGTGTTCGTACCGGCAGATTTGTTGAACTGCtactgatttcttttttcaacacTCAAAGATTTCTTCATAGCAGGCGAAATGGAGGTTGGACTCATTAACTTTTGATTTACTGgtgtgaaatgaaatgtttatATCTAAACGTGGATGGCTTTTGACCAttcgtttaaaaaaaaaaacattcgaATTATTTAATTCTGTTAAAAATTTGCAAATGTGATGATAAATTAAAAGGGATACATAATTAACATATTTATGTTATtcaattccaattggaatgcagtggaagaagagccactctgtggaatccactgttaattcgcaTTTTATTACGAAAAGTTGTGAAACTATAGACTGCCGATAAAAAATATCCAGTCATATTGACCCTATGAAAAAAGAGTAaaagactgggaacgagcaccatgaatgattaataatttcaaaaatatatttcgttTACGAGAAAGAGcatgtctaaattagtaatttagtagagttctgttgttatatattaaatcactgcagagttctaagcatttttaaatgtaattttaattcttaaaaaatgtaccaaaaacatgaaaacgaagCTGATAGGTCCTTGGTTGatgtttccatacaaatctttctaatttcaaacagc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P54961	Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica OX=6973 GN=HMGCS-1 PE=2 SV=1
P23228	Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Gallus gallus OX=9031 GN=HMGCS1 PE=1 SV=1
P54870	Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica OX=6973 GN=HMGCS-2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005551 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08540 all species →	HMG_CoA_synt_C	Hydroxymethylglutaryl-coenzyme A synthase C terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010122 all species →	Family	Hydroxymethylglutaryl-CoA synthase, eukaryotic	Interproscan
IPR013746 all species →	Domain	Hydroxymethylglutaryl-coenzyme A synthase, C-terminal domain	Interproscan
IPR016039 all species →	Homologous_superfamily	Thiolase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43323 all species →	3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004421 all species →	Molecular Function	hydroxymethylglutaryl-CoA synthase activity	Interproscan
GO:0008299 all species →	Biological Process	isoprenoid biosynthetic process	Interproscan
GO:0006084 all species →	Biological Process	acetyl-CoA metabolic process	Interproscan
GO:0010142 all species →	Biological Process	farnesyl diphosphate biosynthetic process, mevalonate pathway	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOJPP00000011503.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.