Gene detail

Detailed information of ENSOJPP00000011685.1 in Anthopleura xanthogrammica

Genomic Location: :...
NR annotation: XP_031564302.1, polyadenylate-binding protein-interacting protein 1-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSOJPT00000013441

TGAGACCTAAAACATCCGTCAGAAACATCGTGGGttgttttttggttgttttatCGTAAAACTGACCTTCTTTTTCGCAATTCTTTGGGCCGTAAAATGACCGTATAACCAAAACTAACCGTCTAAAATGTCGAACAGTTATCATGGACGCGGAATTCCATCCAAAGAGTATACAAAGCAGTTAAGAAGACCTGGTCAGCCTCCACAGAATTCAGCACAAGATGGCGTCCCGTTGAATTCAAATGCTACTGGTGCTACAAGACTTGCAGCAATAGCACTTAATGTGAATGCAAAAGAATTTGTACCAAGGTTCACAGTACCAGCCAAACCCCAAGAGCCAGCTGTCCAACCACCAGACCAGGAAGTTGTGAATTTTGTCAAAGAATTATTGGACAAACTGACATACAGTCCTGGGGAATTTGACCTTGTTGTTGATGATCTGGCATTAGCCTGGAAAGCTAGAATACATGATGTTAGTACTTTGAATGAAGTAGCCAGAGTGATTGTTGAGCAGGCTATTATCCAAACAAACTTCACATACACTGGAGCCAGGCTTTGTGATCTAATCGCACGAAGAAAAGAGCTGAATGATATTCAAGATTGCAAGACATTTAGAGCAATATTCCTCACAAGGTGTTCAGAAGAGCATAATAAGCGAGAGGATTTACTAAAAAATCCCACAACTGTAACAAGAGTACATGGATTTGCTATGTTCCTAGCTGAGCTATTTAGTACATTTAGACTTGAAAACCAGCCACAACCAGTAGAGgttttggggaaaaaacttCTGGAGATGCTGATAACACTCATAAAGCACAGAACTGATGACTCTCTGCTCTATGCTGGCCGTATTCTTAAGCTAACAGGAAGCCTTCTAGAGGATCCACATTATGTCACCCAAGAAGTACAAGACAAGCTTACTGaaatattcaatgaaattCAAACAATCATTCAATCTGATTCTCCTGGAAGATCCATCAAGGTATTCCTACAGTCTGTTGTTGTTCTGCGTGCCAAGAACTGGGGGCGTGAGACATCACCTTTACCTGTTACCAACTCAACACCATCAACTCTGTCTGCTGACGCAGCTCCTTTTCAGTTTCCAGTTGGCAATACATTAGATCCAATGCAATATCCCGATAACCAGGATGCATATTATCCTGCCGATGAACTATTGGATTATTATGAAGACATAACCCCTGTCTATAACCCAGACCAGTGGAATGAATATTGTGAAGACGACAGTGAACCGGAGGACAACTACTATCAGAATGATAACTATGAGAATGGCGATGAAGATGAAGCTTTCACAGAAGAGATGAGACAAGATTTCGACAAGTTTATGCTTGAACAGCATCAGCCTCCAGGAAGCTGAGCCATGTGGGATCCTCAAGTTGtctgaaaatattaatatacacCACGTTATGACGTAACAATGATACAAAGAATGTTTAAGAGATGTGTTTTTAATACTTGTGCGAGGTTGTGCTTACGCTTTTCTTCTTGTTAATCTGATGTAAATAGCAagttagaaaaacaaagatgagTGTCGTGTACTGCCGAGTTCAAATTATTATGTAATTTGACTGTGATAGTACGACTCAGCCAATATATAACACTACAAATCGTTGAAGCAATGAATATGTGTACTTCCTTATGTGCTTGGTTTGTAAACCttcctaaaaaataaaaccgcAAACATGCCCGTAGACTGGAGAAGGGCGGTGGGTTCCAACGCGAACCTCTCCACTATCCTATCCCCAAACttgatacagctattttaaaaaaaaaggtttaagAGGTGAAGGTCGAAAGGAACTGTTACCCAATAAGAATACCGAAACAATGCACCATTCAGCCAAGACCTTAGGGCGCGATTAcatggagcaattttctctgcaacttgtctcacgGCGTtgtgacacaagttgcaagagagtttacacggtgcaacggagacgcaatcggTGCCAAAAGTAgcaacgaattctacttttcgcaacgattgctcTAACTTGTCTCGTCACATTTctcactgtaggttacacgccgcaatgctccatgcaactcgCGTCGCAACGCCGTgacgagacaagttgcagagaaaattgcttcgtgtaatcgcgcctttggatggcattgtttaggtattttagaaatatatatgaaaaaattaccccgttcgccccttcaacctttttgaaaCAGCTGTATATGAATAGGTTTGTTTATATGGGGTCCTATACTACACTAACATCTAAGGTTTTCTATGAATTGTTTCACAATTAAAAACATCCCTttaaaagacatggccgccatgaggAATGAAGACCAAAGTAGACCGATGTAAATTCTAGTTTTTGATCATAAgaaa

Protein

Uniprot

Uniprot term	Description
Q7ZYB4	Polyadenylate-binding protein-interacting protein 1 OS=Xenopus laevis OX=8355 GN=paip1 PE=1 SV=1
Q9H074	Polyadenylate-binding protein-interacting protein 1 OS=Homo sapiens OX=9606 GN=PAIP1 PE=1 SV=1
Q8VE62	Polyadenylate-binding protein-interacting protein 1 OS=Mus musculus OX=10090 GN=Paip1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07145	PAM2	Ataxin-2 C-terminal region	Motif	Interproscan
PF02854	MIF4G	MIF4G domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003890	Domain	MIF4G-like, type 3	Interproscan
IPR009818	Domain	Ataxin-2, C-terminal	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR051367	Family	mRNA Translation Regulation/Replication-dependent Histone mRNA Translation	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23254	EIF4G DOMAIN PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006446	Biological Process	regulation of translational initiation	Interproscan
GO:0008494	Molecular Function	translation activator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14322	PAIP1; polyadenylate-binding protein-interacting protein 1	-	Messenger RNA biogenesis	ko03019	deepkoala