Gene detail

Detailed information of ENSOJPP00000013003.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_028514107.1, hemicentin-1, partial [Exaiptasia diaphana]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

ENSOJPT00000014965

ATGGCCTGTCATTATGAAGGGAAACCAGTTGCCGATGCATTGTGGTTTAGGAACAACACCAGACTGGACAATTCCTCAGACTCGAGAATAGGAATCGCACGTTCAGGAAATGCTTCATTGACGGTATCCTTTCTGACCATCACTAACCTAAAAAGACGCGACGAAGGCAGGTACAGGTGTCAAGTAAACAACTCGGTGGGAGGTCCTGCTACGTCACAAGAGGCACAGCTGACAGTGAATTATCCACCTGTCATCTTTGCTCCACCGCTCACCATCACAACCAACGAAACGAACAATGTCACTCTTAGCTGCATCATGGAAGGAAAGCCACAACCAAACGTGACTTGGAGTAAAAATGGAactgatgttgatgttgtcGGTGACCACAGGATAACGCCATCGCATCCTTGGAGCTATGGAAACTCCACTGCAACCCTGACCATTCAGAATGTGAGCAGGTCTGACAAGGGTTCGTACGTTTGTGTTGCTGATAACAGTGTTGGAGCCGCCGTCACCTCAGCAGCTGCCAAGTTGACCGTCAACTATCCTTCCAGAATCTTCGTCTCGCCTCAGGACGTTATCAAAAACGAAAATCAGAACGTGGTGTTTGAGTGCAGTTTAGAGGGCAATCCGTTGTCAAGGGTGACGTGGTGGTATGGACAAAAACAAATCGATACGTCACAGACCAGATTTGTGGCCAGTGATCCTACTGTGTTTACTAGGAGCCTAGCAAGGTTGACAATAATGAATGTAGCGCGAAGCGACGAAGGGTTTTACAGATGCAAGGTGGAGAATGAACTACACACAGAGTACTCGATGTCTGCTTACTTGACGGTGCAGTTTCAGCCAAAGATTCTGATCGATCCTTTGCCCAAAATAAGGAATGAAAAACAGAATGTGATGTTGTCCTGTCGTTATGAAGGCAAACCAATTGCCGATGCAGTGTGGTTTAGGAACAACACCAGACTGGACAATTCCTCACACTTGAGAATGGGAATCGCACGTTCAGGAAATGCTTCATTAACGGAATCCATTCTGACCATCACTAACCTTAACAGACGAGACGAAGGCAGGTACAAGTGTCAAGTAAACAACTCGGTGGGAGGTCCTGCTACGTCACAAGAGGCACAGCTGACAGTGAATTATCCACCTGTCATCTTTGCTCCACCGCTCACCATCACAACCAACGAAACCAACAATGTCACTCTTAGCTGCATCATGGAAGGAAAGCCACAACCAAACGTGACTTGGAGTAAAAATGGAactgatgttgatgttgacgGTGACAACAGGATAACGACATCGCATCCTTGGAGCTATGGAAACTCTACTGCAACCCTGACCATTCAGAATGTGAGCAGGTCTGACGAGGGTTCGTACGTTTGTGTTGCTGATAACAGTGTTGGAGCCGCCGTCACCTCAGCAGCTACCCAGTTGGCCGTCTACTATCCTTCCAGAATCTTCGTCTCGCCTCAGAACGTTACCGAAAACGAAAATGAGAACGTGGTGTTTGAGTGCCGTTTAGAGGGCAAGCCGTTCTCAAGGGTGACGTGGTGGTATGGACAGAAGCAGATCAATACGTCACAAACAAGATATGTGGCCAGTGATCCTACTGTGTTTACTAGGAGCCTAGCAAGGTTGACAATAATGAATTTGACGCGAAGCGACGAAGGGTTCTACAGATGCAAGGTGGAGAATGAACTACACACAGAGTACTCGATGTCTGCTTACTTGACGGTGCAGTTTCAACCAAAGATTCTGATCGATCCTTTGTCCAAGATAAGGAATGAAAAACAGAATGTGATGTTGTACTGTCGTTATGAAGGCAAACCAGTTGCCGATGCAGTGTGGTTTAGGAACAACACCAGACTGGACGATTCCTCAGACTCGAGAATAGGAATCGCACGTTCAGGAAATGCTTCATTGGCGGAATCCTTTCTGACCATCACTAACCTTAACAGACGAGACGAAGGCAGGTACAAGTGTCAAGTGAACAACTCTGTGGGAATTTCTGCTACGTCACAAGAGGCACAGCTGACAGTAAAT

Transcript

ENSOJPT00000014965

AACCAAATATTCTCTCATATCCTTCTAACGAGACAAAAGTCGAGAAAGAGAATGTGACGATGGCCTGTCATTATGAAGGGAAACCAGTTGCCGATGCATTGTGGTTTAGGAACAACACCAGACTGGACAATTCCTCAGACTCGAGAATAGGAATCGCACGTTCAGGAAATGCTTCATTGACGGTATCCTTTCTGACCATCACTAACCTAAAAAGACGCGACGAAGGCAGGTACAGGTGTCAAGTAAACAACTCGGTGGGAGGTCCTGCTACGTCACAAGAGGCACAGCTGACAGTGAATTATCCACCTGTCATCTTTGCTCCACCGCTCACCATCACAACCAACGAAACGAACAATGTCACTCTTAGCTGCATCATGGAAGGAAAGCCACAACCAAACGTGACTTGGAGTAAAAATGGAactgatgttgatgttgtcGGTGACCACAGGATAACGCCATCGCATCCTTGGAGCTATGGAAACTCCACTGCAACCCTGACCATTCAGAATGTGAGCAGGTCTGACAAGGGTTCGTACGTTTGTGTTGCTGATAACAGTGTTGGAGCCGCCGTCACCTCAGCAGCTGCCAAGTTGACCGTCAACTATCCTTCCAGAATCTTCGTCTCGCCTCAGGACGTTATCAAAAACGAAAATCAGAACGTGGTGTTTGAGTGCAGTTTAGAGGGCAATCCGTTGTCAAGGGTGACGTGGTGGTATGGACAAAAACAAATCGATACGTCACAGACCAGATTTGTGGCCAGTGATCCTACTGTGTTTACTAGGAGCCTAGCAAGGTTGACAATAATGAATGTAGCGCGAAGCGACGAAGGGTTTTACAGATGCAAGGTGGAGAATGAACTACACACAGAGTACTCGATGTCTGCTTACTTGACGGTGCAGTTTCAGCCAAAGATTCTGATCGATCCTTTGCCCAAAATAAGGAATGAAAAACAGAATGTGATGTTGTCCTGTCGTTATGAAGGCAAACCAATTGCCGATGCAGTGTGGTTTAGGAACAACACCAGACTGGACAATTCCTCACACTTGAGAATGGGAATCGCACGTTCAGGAAATGCTTCATTAACGGAATCCATTCTGACCATCACTAACCTTAACAGACGAGACGAAGGCAGGTACAAGTGTCAAGTAAACAACTCGGTGGGAGGTCCTGCTACGTCACAAGAGGCACAGCTGACAGTGAATTATCCACCTGTCATCTTTGCTCCACCGCTCACCATCACAACCAACGAAACCAACAATGTCACTCTTAGCTGCATCATGGAAGGAAAGCCACAACCAAACGTGACTTGGAGTAAAAATGGAactgatgttgatgttgacgGTGACAACAGGATAACGACATCGCATCCTTGGAGCTATGGAAACTCTACTGCAACCCTGACCATTCAGAATGTGAGCAGGTCTGACGAGGGTTCGTACGTTTGTGTTGCTGATAACAGTGTTGGAGCCGCCGTCACCTCAGCAGCTACCCAGTTGGCCGTCTACTATCCTTCCAGAATCTTCGTCTCGCCTCAGAACGTTACCGAAAACGAAAATGAGAACGTGGTGTTTGAGTGCCGTTTAGAGGGCAAGCCGTTCTCAAGGGTGACGTGGTGGTATGGACAGAAGCAGATCAATACGTCACAAACAAGATATGTGGCCAGTGATCCTACTGTGTTTACTAGGAGCCTAGCAAGGTTGACAATAATGAATTTGACGCGAAGCGACGAAGGGTTCTACAGATGCAAGGTGGAGAATGAACTACACACAGAGTACTCGATGTCTGCTTACTTGACGGTGCAGTTTCAACCAAAGATTCTGATCGATCCTTTGTCCAAGATAAGGAATGAAAAACAGAATGTGATGTTGTACTGTCGTTATGAAGGCAAACCAGTTGCCGATGCAGTGTGGTTTAGGAACAACACCAGACTGGACGATTCCTCAGACTCGAGAATAGGAATCGCACGTTCAGGAAATGCTTCATTGGCGGAATCCTTTCTGACCATCACTAACCTTAACAGACGAGACGAAGGCAGGTACAAGTGTCAAGTGAACAACTCTGTGGGAATTTCTGCTACGTCACAAGAGGCACAGCTGACAGTAAATT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O01761	Muscle M-line assembly protein unc-89 OS=Caenorhabditis elegans OX=6239 GN=unc-89 PE=1 SV=3
Q96RW7	Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
P31836	Neural cell adhesion molecule 1 OS=Bos taurus OX=9913 GN=NCAM1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000332 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013106 all species →	Domain	Immunoglobulin V-set domain	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45889 all species →	IG-LIKE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSOJPP00000013003.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06467	CD22, SIGLEC2; CD22 antigen	-	Lectins	ko04091	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.